RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C ECM29P38737 1868 aa0.82□□□□□ -2.28
VTI1YMR197C UTP10P42945 1769 aaKnown RBP0.81□□□□□ -2.28
VTI1YMR197C TY1B-BLQ12490 1755 aa0.81□□□□□ -2.28
VTI1YMR197C YLR146W-AQ2V2P1 62 aa0.81□□□□□ -2.28
VTI1YMR197C TY2B-LR1P0C2J3 1770 aa0.8□□□□□ -2.28
VTI1YMR197C TY2B-FP0CX63 1770 aa0.8□□□□□ -2.28
VTI1YMR197C TY2B-GR2P0CX64 1770 aa0.8□□□□□ -2.28
VTI1YMR197C RIM15P43565 1770 aa0.8□□□□□ -2.28
VTI1YMR197C TY2B-DR2Q03494 1770 aa0.8□□□□□ -2.28
VTI1YMR197C TY2B-OR1Q12113 1770 aa0.8□□□□□ -2.28
VTI1YMR197C TY2B-BQ12491 1770 aa0.8□□□□□ -2.28
VTI1YMR197C TY2B-OR2Q12501 1770 aa0.8□□□□□ -2.28
VTI1YMR197C MOT1P32333 1867 aa0.8□□□□□ -2.28
VTI1YMR197C RPS30AP0CX33 63 aaKnown RBP0.8□□□□□ -2.28
VTI1YMR197C RPS30BP0CX34 63 aaKnown RBP0.8□□□□□ -2.28
VTI1YMR197C YIL134C-AQ45U18 67 aa0.8□□□□□ -2.28
VTI1YMR197C PMD1P32634 1753 aa0.8□□□□□ -2.28
VTI1YMR197C MMS1Q06211 1407 aa0.8□□□□□ -2.28
VTI1YMR197C TY3B-GQ99315 1547 aa0.79□□□□□ -2.28
VTI1YMR197C ARO1P08566 1588 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY1B-DR5P0C2I2 1755 aa0.79□□□□□ -2.28
VTI1YMR197C TY1B-PR1P0C2I9 1755 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY1B-JR2P47100 1755 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY1B-ER2Q03619 1755 aa0.79□□□□□ -2.28
VTI1YMR197C TY1B-MR2Q04670 1755 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY1B-ML1Q04711 1755 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY2B-DR3Q07791 1770 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY1B-LR1Q12088 1755 aaKnown RBP0.79□□□□□ -2.28
VTI1YMR197C TY1B-GR2Q12269 1755 aa0.79□□□□□ -2.28
VTI1YMR197C TY1B-GR3Q12316 1755 aa0.79□□□□□ -2.28
VTI1YMR197C TY1B-ORQ92393 1755 aa0.79□□□□□ -2.28
VTI1YMR197C YBR016WP38216 128 aa0.79□□□□□ -2.28
VTI1YMR197C BCK1Q01389 1478 aa0.79□□□□□ -2.28
VTI1YMR197C DNF2Q12675 1612 aa0.78□□□□□ -2.28
VTI1YMR197C YBL039W-BP0C268 59 aa0.78□□□□□ -2.28
VTI1YMR197C YFR009W-AP0C5M9 85 aa0.78□□□□□ -2.28
VTI1YMR197C YBR200W-AQ3E755 54 aa0.78□□□□□ -2.28
VTI1YMR197C YOR011W-AQ3E807 68 aa0.78□□□□□ -2.28
VTI1YMR197C PDR5P33302 1511 aaKnown RBP0.78□□□□□ -2.28
VTI1YMR197C RRP5Q05022 1729 aaKnown RBP0.78□□□□□ -2.29
VTI1YMR197C RPS29BP41058 56 aaKnown RBP0.77□□□□□ -2.29
VTI1YMR197C TY1B-DR6P0C2I3 1755 aa0.76□□□□□ -2.29
VTI1YMR197C TY1B-LR2P0C2I5 1755 aa0.76□□□□□ -2.29
VTI1YMR197C TY1B-MR1Q04214 1755 aa0.76□□□□□ -2.29
VTI1YMR197C TY1B-NL1Q12112 1755 aa0.76□□□□□ -2.29
VTI1YMR197C TY1B-GR1Q12141 1755 aa0.76□□□□□ -2.29
VTI1YMR197C TY1B-PLQ12414 1755 aaKnown RBP0.76□□□□□ -2.29
VTI1YMR197C APC1P53886 1748 aa0.76□□□□□ -2.29
VTI1YMR197C OLI1P61829 76 aa0.76□□□□□ -2.29
VTI1YMR197C YKL023C-AQ2V2P3 75 aa0.76□□□□□ -2.29
VTI1YMR197C YGR025WP53216 100 aa0.75□□□□□ -2.29
VTI1YMR197C YOR394C-AQ8TGJ0 55 aa0.75□□□□□ -2.29
VTI1YMR197C YOL166W-AQ8TGJ1 51 aa0.75□□□□□ -2.29
VTI1YMR197C KOG1P38873 1557 aa0.74□□□□□ -2.29
VTI1YMR197C YCF1P39109 1515 aaKnown RBP0.74□□□□□ -2.29
VTI1YMR197C RPS27AP35997 82 aaKnown RBP0.74□□□□□ -2.29
VTI1YMR197C BPH1P25356 2167 aa0.74□□□□□ -2.29
VTI1YMR197C STT4P37297 1900 aa0.74□□□□□ -2.29
VTI1YMR197C TY1B-DR4Q07793 1604 aa0.73□□□□□ -2.29
VTI1YMR197C HKR1P41809 1802 aa0.73□□□□□ -2.29
VTI1YMR197C SPT6P23615 1451 aaKnown RBP0.73□□□□□ -2.29
VTI1YMR197C BLM10P43583 2143 aa0.73□□□□□ -2.29
VTI1YMR197C TY1B-JR1P47098 1755 aa0.73□□□□□ -2.29
VTI1YMR197C TY1B-ML2Q03434 1755 aaKnown RBP0.73□□□□□ -2.29
VTI1YMR197C TY1B-ER1Q03612 1755 aa0.73□□□□□ -2.29
VTI1YMR197C TY1B-OLQ12273 1755 aa0.73□□□□□ -2.29
VTI1YMR197C VMR1P38735 1592 aa0.72□□□□□ -2.29
VTI1YMR197C IRC20Q06554 1556 aa0.72□□□□□ -2.29
VTI1YMR197C YBL044WP38194 122 aa0.72□□□□□ -2.29
VTI1YMR197C YMR001C-AQ8TGS9 76 aa0.72□□□□□ -2.29
VTI1YMR197C VTH1P40438 1549 aa0.72□□□□□ -2.29
VTI1YMR197C VTH2P40890 1549 aa0.72□□□□□ -2.29
VTI1YMR197C PDR15Q04182 1529 aaKnown RBP0.72□□□□□ -2.29
VTI1YMR197C FKS3Q04952 1785 aa0.72□□□□□ -2.29
VTI1YMR197C SNF2P22082 1703 aa0.72□□□□□ -2.29
VTI1YMR197C PRP8P33334 2413 aaKnown RBP0.72□□□□□ -2.29
VTI1YMR197C SNQ2P32568 1501 aaKnown RBP0.71□□□□□ -2.3
VTI1YMR197C YLR157W-DP0CE99 70 aa0.71□□□□□ -2.3
VTI1YMR197C MON2P48563 1636 aaPredicted RBP0.71□□□□□ -2.3
VTI1YMR197C CDC25P04821 1589 aa0.7□□□□□ -2.3
VTI1YMR197C HAP1P0CE41 1502 aa0.69□□□□□ -2.3
VTI1YMR197C YBR230W-AQ3E762 66 aa0.67□□□□□ -2.3
VTI1YMR197C RPO21P04050 1733 aaKnown RBP0.67□□□□□ -2.3
VTI1YMR197C SIP18P50263 79 aa0.66□□□□□ -2.3
VTI1YMR197C YOR192C-CQ3E736 78 aa0.66□□□□□ -2.3
VTI1YMR197C SSK2P53599 1579 aa0.66□□□□□ -2.3
VTI1YMR197C SPO14P36126 1683 aa0.65□□□□□ -2.31
VTI1YMR197C RPS27BP38711 82 aa0.63□□□□□ -2.31
VTI1YMR197C YOR008C-AQ3E7B9 74 aa0.63□□□□□ -2.31
VTI1YMR197C YCR108CQ3E819 63 aa0.62□□□□□ -2.31
VTI1YMR197C YBT1P32386 1661 aa0.61□□□□□ -2.31
VTI1YMR197C TOS6P48560 102 aa0.6□□□□□ -2.31
VTI1YMR197C YGR146C-AQ8TGT9 53 aa0.58□□□□□ -2.32
VTI1YMR197C PEP1P32319 1579 aa0.57□□□□□ -2.32
VTI1YMR197C YOR093CQ12275 1648 aa0.57□□□□□ -2.32
VTI1YMR197C YPR010C-AA5Z2X5 72 aa0.57□□□□□ -2.32
VTI1YMR197C SEN1Q00416 2231 aaKnown RBP0.57□□□□□ -2.32
VTI1YMR197C NUP188P52593 1655 aaKnown RBP0.56□□□□□ -2.32
VTI1YMR197C ULS1Q08562 1619 aa0.56□□□□□ -2.32
VTI1YMR197C COA2Q3E823 68 aa0.52□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms