RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C TY2B-LR1P0C2J3 1770 aa1.37□□□□□ -2.19
PEX12YMR026C TY2B-FP0CX63 1770 aa1.37□□□□□ -2.19
PEX12YMR026C TY2B-GR2P0CX64 1770 aa1.37□□□□□ -2.19
PEX12YMR026C TY2B-DR2Q03494 1770 aa1.37□□□□□ -2.19
PEX12YMR026C TY2B-OR1Q12113 1770 aa1.37□□□□□ -2.19
PEX12YMR026C TY2B-BQ12491 1770 aa1.37□□□□□ -2.19
PEX12YMR026C TY2B-OR2Q12501 1770 aa1.37□□□□□ -2.19
PEX12YMR026C SDH6Q3E785 79 aa1.37□□□□□ -2.19
PEX12YMR026C DNF1P32660 1571 aa1.36□□□□□ -2.19
PEX12YMR026C YFL041W-AQ3E817 63 aa1.36□□□□□ -2.19
PEX12YMR026C HKR1P41809 1802 aa1.36□□□□□ -2.19
PEX12YMR026C TY2B-DR3Q07791 1770 aaKnown RBP1.35□□□□□ -2.19
PEX12YMR026C APC1P53886 1748 aa1.35□□□□□ -2.19
PEX12YMR026C ARO1P08566 1588 aaKnown RBP1.34□□□□□ -2.2
PEX12YMR026C YJR107C-AP0CT86 78 aa1.33□□□□□ -2.2
PEX12YMR026C ATX1P38636 73 aa1.32□□□□□ -2.2
PEX12YMR026C SPI1P40092 148 aa1.32□□□□□ -2.2
PEX12YMR026C YPR108W-AQ3E7B3 70 aa1.32□□□□□ -2.2
PEX12YMR026C ATP17Q06405 101 aa1.31□□□□□ -2.2
PEX12YMR026C BPH1P25356 2167 aa1.31□□□□□ -2.2
PEX12YMR026C IML1P47170 1584 aa1.3□□□□□ -2.2
PEX12YMR026C RRP5Q05022 1729 aaKnown RBP1.3□□□□□ -2.2
PEX12YMR026C VPS15P22219 1454 aa1.3□□□□□ -2.2
PEX12YMR026C SSS1P35179 80 aa1.29□□□□□ -2.2
PEX12YMR026C YBR032WP38223 100 aa1.29□□□□□ -2.2
PEX12YMR026C FKS3Q04952 1785 aa1.29□□□□□ -2.2
PEX12YMR026C YBR016WP38216 128 aa1.28□□□□□ -2.2
PEX12YMR026C RPS29BP41058 56 aaKnown RBP1.28□□□□□ -2.2
PEX12YMR026C EDC1P53080 175 aaPredicted RBP1.28□□□□□ -2.2
PEX12YMR026C YOR032W-AQ8TGS1 66 aa1.28□□□□□ -2.2
PEX12YMR026C RPO31P04051 1460 aa1.28□□□□□ -2.2
PEX12YMR026C PAU7P39545 55 aa1.27□□□□□ -2.21
PEX12YMR026C ERI1P62651 68 aaKnown RBP1.27□□□□□ -2.21
PEX12YMR026C MYO4P32492 1471 aa1.25□□□□□ -2.21
PEX12YMR026C YKL018C-AQ3E7A7 99 aa1.25□□□□□ -2.21
PEX12YMR026C IQG1Q12280 1495 aa1.24□□□□□ -2.21
PEX12YMR026C YDR246W-AQ3E763 66 aa1.24□□□□□ -2.21
PEX12YMR026C DNF2Q12675 1612 aa1.23□□□□□ -2.21
PEX12YMR026C YFR009W-AP0C5M9 85 aa1.22□□□□□ -2.21
PEX12YMR026C PDR12Q02785 1511 aa1.2□□□□□ -2.22
PEX12YMR026C YOL131WQ08270 108 aa1.18□□□□□ -2.22
PEX12YMR026C YSY6P38374 65 aa1.16□□□□□ -2.22
PEX12YMR026C SMC4Q12267 1418 aa1.15□□□□□ -2.22
PEX12YMR026C YFR010W-AP0C5N0 62 aa1.15□□□□□ -2.23
PEX12YMR026C YIL134C-AQ45U18 67 aa1.15□□□□□ -2.23
PEX12YMR026C BCK1Q01389 1478 aa1.15□□□□□ -2.23
PEX12YMR026C KOG1P38873 1557 aa1.14□□□□□ -2.23
PEX12YMR026C IRC20Q06554 1556 aa1.14□□□□□ -2.23
PEX12YMR026C YIL102C-AQ2V2P5 75 aa1.14□□□□□ -2.23
PEX12YMR026C TY3B-GQ99315 1547 aa1.14□□□□□ -2.23
PEX12YMR026C RPO21P04050 1733 aaKnown RBP1.13□□□□□ -2.23
PEX12YMR026C YGR025WP53216 100 aa1.13□□□□□ -2.23
PEX12YMR026C YDR182W-AQ3E796 67 aa1.12□□□□□ -2.23
PEX12YMR026C HUB1Q6Q546 73 aa1.12□□□□□ -2.23
PEX12YMR026C YBR200W-AQ3E755 54 aa1.11□□□□□ -2.23
PEX12YMR026C VMR1P38735 1592 aa1.11□□□□□ -2.23
PEX12YMR026C RPS27AP35997 82 aaKnown RBP1.1□□□□□ -2.23
PEX12YMR026C YLR146W-AQ2V2P1 62 aa1.1□□□□□ -2.23
PEX12YMR026C YOR011W-AQ3E807 68 aa1.09□□□□□ -2.23
PEX12YMR026C YBL044WP38194 122 aa1.08□□□□□ -2.24
PEX12YMR026C YBL039W-BP0C268 59 aa1.07□□□□□ -2.24
PEX12YMR026C RPS30AP0CX33 63 aaKnown RBP1.07□□□□□ -2.24
PEX12YMR026C RPS30BP0CX34 63 aaKnown RBP1.07□□□□□ -2.24
PEX12YMR026C VMA9Q3E7B6 73 aa1.07□□□□□ -2.24
PEX12YMR026C MMS1Q06211 1407 aa1.06□□□□□ -2.24
PEX12YMR026C YOR394C-AQ8TGJ0 55 aa1.05□□□□□ -2.24
PEX12YMR026C SPO14P36126 1683 aa1.04□□□□□ -2.24
PEX12YMR026C SEN1Q00416 2231 aaKnown RBP1.04□□□□□ -2.24
PEX12YMR026C HAP1P0CE41 1502 aa1.04□□□□□ -2.24
PEX12YMR026C TAO3P40468 2376 aa1.04□□□□□ -2.24
PEX12YMR026C VTH1P40438 1549 aa1.03□□□□□ -2.24
PEX12YMR026C VTH2P40890 1549 aa1.03□□□□□ -2.24
PEX12YMR026C OLI1P61829 76 aa1.02□□□□□ -2.25
PEX12YMR026C YOL166W-AQ8TGJ1 51 aa1□□□□□ -2.25
PEX12YMR026C PDR5P33302 1511 aaKnown RBP0.98□□□□□ -2.25
PEX12YMR026C PDR15Q04182 1529 aaKnown RBP0.95□□□□□ -2.26
PEX12YMR026C TY1B-DR4Q07793 1604 aa0.94□□□□□ -2.26
PEX12YMR026C YCF1P39109 1515 aaKnown RBP0.94□□□□□ -2.26
PEX12YMR026C CDC25P04821 1589 aa0.92□□□□□ -2.26
PEX12YMR026C YCR108CQ3E819 63 aa0.92□□□□□ -2.26
PEX12YMR026C MON2P48563 1636 aaPredicted RBP0.91□□□□□ -2.26
PEX12YMR026C YKL023C-AQ2V2P3 75 aa0.91□□□□□ -2.26
PEX12YMR026C YMR001C-AQ8TGS9 76 aa0.91□□□□□ -2.26
PEX12YMR026C YBT1P32386 1661 aa0.91□□□□□ -2.26
PEX12YMR026C SPT6P23615 1451 aaKnown RBP0.87□□□□□ -2.27
PEX12YMR026C YLR157W-DP0CE99 70 aa0.87□□□□□ -2.27
PEX12YMR026C RPS27BP38711 82 aa0.85□□□□□ -2.27
PEX12YMR026C SIP18P50263 79 aa0.85□□□□□ -2.27
PEX12YMR026C NUP188P52593 1655 aaKnown RBP0.84□□□□□ -2.28
PEX12YMR026C SNQ2P32568 1501 aaKnown RBP0.83□□□□□ -2.28
PEX12YMR026C YBR230W-AQ3E762 66 aa0.81□□□□□ -2.28
PEX12YMR026C YOR008C-AQ3E7B9 74 aa0.79□□□□□ -2.28
PEX12YMR026C SSK2P53599 1579 aa0.79□□□□□ -2.28
PEX12YMR026C YOR192C-CQ3E736 78 aa0.78□□□□□ -2.28
PEX12YMR026C YOR093CQ12275 1648 aa0.78□□□□□ -2.29
PEX12YMR026C TOS6P48560 102 aa0.77□□□□□ -2.29
PEX12YMR026C YGR146C-AQ8TGT9 53 aa0.69□□□□□ -2.3
PEX12YMR026C USO1P25386 1790 aa0.69□□□□□ -2.3
PEX12YMR026C UTP20P35194 2493 aaKnown RBP0.67□□□□□ -2.3
PEX12YMR026C RPS29AP41057 56 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms