RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP188	YML103C	TY1B-MR2	Q04670	1755 aa	Known RBP	0.33	□□□□□ -2.36
NUP188	YML103C	TY1B-NL1	Q12112	1755 aa		0.33	□□□□□ -2.36
NUP188	YML103C	TY1B-GR1	Q12141	1755 aa		0.33	□□□□□ -2.36
NUP188	YML103C	TY1B-GR3	Q12316	1755 aa		0.33	□□□□□ -2.36
NUP188	YML103C	TY1B-PL	Q12414	1755 aa	Known RBP	0.33	□□□□□ -2.36
NUP188	YML103C	TY1B-OR	Q92393	1755 aa		0.33	□□□□□ -2.36
NUP188	YML103C	YBL039W-B	P0C268	59 aa		0.33	□□□□□ -2.36
NUP188	YML103C	YBL044W	P38194	122 aa		0.33	□□□□□ -2.36
NUP188	YML103C	YCR108C	Q3E819	63 aa		0.32	□□□□□ -2.36
NUP188	YML103C	YGR035W-A	Q45U48	73 aa		0.32	□□□□□ -2.36
NUP188	YML103C	ECM29	P38737	1868 aa		0.32	□□□□□ -2.36
NUP188	YML103C	YDL022C-A	P0C5L6	82 aa		0.32	□□□□□ -2.36
NUP188	YML103C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.32	□□□□□ -2.36
NUP188	YML103C	TY1B-PR2	P0C2J0	1756 aa		0.32	□□□□□ -2.36
NUP188	YML103C	YOR394C-A	Q8TGJ0	55 aa		0.32	□□□□□ -2.36
NUP188	YML103C	IML1	P47170	1584 aa		0.32	□□□□□ -2.36
NUP188	YML103C	TIM12	P32830	109 aa		0.31	□□□□□ -2.36
NUP188	YML103C	UFD4	P33202	1483 aa		0.31	□□□□□ -2.36
NUP188	YML103C	NUP159	P40477	1460 aa		0.31	□□□□□ -2.36
NUP188	YML103C	YBR200W-A	Q3E755	54 aa		0.31	□□□□□ -2.36
NUP188	YML103C	YDR182W-A	Q3E796	67 aa		0.31	□□□□□ -2.36
NUP188	YML103C	IQG1	Q12280	1495 aa		0.31	□□□□□ -2.36
NUP188	YML103C	YSY6	P38374	65 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-DR5	P0C2I2	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-JR1	P47098	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-ML2	Q03434	1755 aa	Known RBP	0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-ER1	Q03612	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-ER2	Q03619	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-DR1	Q03855	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-ML1	Q04711	1755 aa	Known RBP	0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-LR1	Q12088	1755 aa	Known RBP	0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-GR2	Q12269	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-OL	Q12273	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	TY1B-DR3	Q99231	1755 aa		0.3	□□□□□ -2.36
NUP188	YML103C	YOR032W-A	Q8TGS1	66 aa		0.29	□□□□□ -2.36
NUP188	YML103C	STT4	P37297	1900 aa		0.29	□□□□□ -2.36
NUP188	YML103C	TY2B-C	P25384	1770 aa		0.29	□□□□□ -2.36
NUP188	YML103C	TY2B-DR1	Q12472	1770 aa		0.29	□□□□□ -2.36
NUP188	YML103C	RPO31	P04051	1460 aa		0.29	□□□□□ -2.36
NUP188	YML103C	SCC2	Q04002	1493 aa		0.29	□□□□□ -2.36
NUP188	YML103C	YBR230W-A	Q3E762	66 aa		0.29	□□□□□ -2.36
NUP188	YML103C	IRC20	Q06554	1556 aa		0.29	□□□□□ -2.36
NUP188	YML103C	UTP10	P42945	1769 aa	Known RBP	0.29	□□□□□ -2.36
NUP188	YML103C	YIL102C-A	Q2V2P5	75 aa		0.28	□□□□□ -2.36
NUP188	YML103C	RPS29A	P41057	56 aa	Known RBP	0.28	□□□□□ -2.36
NUP188	YML103C	YOL131W	Q08270	108 aa		0.28	□□□□□ -2.36
NUP188	YML103C	DOP1	Q03921	1698 aa		0.28	□□□□□ -2.36
NUP188	YML103C	ERI1	P62651	68 aa	Known RBP	0.28	□□□□□ -2.37
NUP188	YML103C	PMD1	P32634	1753 aa		0.27	□□□□□ -2.37
NUP188	YML103C	TY3B-G	Q99315	1547 aa		0.27	□□□□□ -2.37
NUP188	YML103C	TOS6	P48560	102 aa		0.26	□□□□□ -2.37
NUP188	YML103C	RPS27A	P35997	82 aa	Known RBP	0.26	□□□□□ -2.37
NUP188	YML103C	BCK1	Q01389	1478 aa		0.26	□□□□□ -2.37
NUP188	YML103C	RPS30A	P0CX33	63 aa	Known RBP	0.26	□□□□□ -2.37
NUP188	YML103C	RPS30B	P0CX34	63 aa	Known RBP	0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-LR1	P0C2J3	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-F	P0CX63	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-GR2	P0CX64	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-DR2	Q03494	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-OR1	Q12113	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-B	Q12491	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	TY2B-OR2	Q12501	1770 aa		0.26	□□□□□ -2.37
NUP188	YML103C	MYO4	P32492	1471 aa		0.25	□□□□□ -2.37
NUP188	YML103C	YLR157W-D	P0CE99	70 aa		0.25	□□□□□ -2.37
NUP188	YML103C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.25	□□□□□ -2.37
NUP188	YML103C	TAO3	P40468	2376 aa		0.25	□□□□□ -2.37
NUP188	YML103C	TY2B-DR3	Q07791	1770 aa	Known RBP	0.25	□□□□□ -2.37
NUP188	YML103C	VTH1	P40438	1549 aa		0.25	□□□□□ -2.37
NUP188	YML103C	VTH2	P40890	1549 aa		0.25	□□□□□ -2.37
NUP188	YML103C	VPS15	P22219	1454 aa		0.24	□□□□□ -2.37
NUP188	YML103C	YDR524C-B	Q3E6R4	66 aa		0.24	□□□□□ -2.37
NUP188	YML103C	TCB3	Q03640	1545 aa	Known RBP	0.24	□□□□□ -2.37
NUP188	YML103C	YGL258W-A	Q3E740	77 aa		0.23	□□□□□ -2.37
NUP188	YML103C	VMA9	Q3E7B6	73 aa		0.23	□□□□□ -2.37
NUP188	YML103C	BPH1	P25356	2167 aa		0.23	□□□□□ -2.37
NUP188	YML103C	DNF2	Q12675	1612 aa		0.23	□□□□□ -2.37
NUP188	YML103C	YGR146C-A	Q8TGT9	53 aa		0.22	□□□□□ -2.37
NUP188	YML103C	RPO21	P04050	1733 aa	Known RBP	0.22	□□□□□ -2.37
NUP188	YML103C	ARO1	P08566	1588 aa	Known RBP	0.22	□□□□□ -2.37
NUP188	YML103C	PDR15	Q04182	1529 aa	Known RBP	0.21	□□□□□ -2.38
NUP188	YML103C	PDR12	Q02785	1511 aa		0.21	□□□□□ -2.38
NUP188	YML103C	HAP1	P0CE41	1502 aa		0.2	□□□□□ -2.38
NUP188	YML103C	YOR072W-B	Q3E832	53 aa		0.2	□□□□□ -2.38
NUP188	YML103C	YLL006W-A	Q3E814	58 aa		0.2	□□□□□ -2.38
NUP188	YML103C	DNF1	P32660	1571 aa		0.2	□□□□□ -2.38
NUP188	YML103C	VMR1	P38735	1592 aa		0.2	□□□□□ -2.38
NUP188	YML103C	SEN1	Q00416	2231 aa	Known RBP	0.2	□□□□□ -2.38
NUP188	YML103C	YKL023C-A	Q2V2P3	75 aa		0.18	□□□□□ -2.38
NUP188	YML103C	YOL166W-A	Q8TGJ1	51 aa		0.18	□□□□□ -2.38
NUP188	YML103C	SPO14	P36126	1683 aa		0.17	□□□□□ -2.38
NUP188	YML103C	RPS27B	P38711	82 aa		0.17	□□□□□ -2.38
NUP188	YML103C	PDR5	P33302	1511 aa	Known RBP	0.17	□□□□□ -2.38
NUP188	YML103C	RRP5	Q05022	1729 aa	Known RBP	0.17	□□□□□ -2.38
NUP188	YML103C	YFR010W-A	P0C5N0	62 aa		0.16	□□□□□ -2.38
NUP188	YML103C	YCF1	P39109	1515 aa	Known RBP	0.16	□□□□□ -2.38
NUP188	YML103C	FKS3	Q04952	1785 aa		0.15	□□□□□ -2.39
NUP188	YML103C	YHR050W-A	Q05451	56 aa		0.15	□□□□□ -2.39
NUP188	YML103C	YOR192C-C	Q3E736	78 aa		0.12	□□□□□ -2.39
NUP188	YML103C	SNQ2	P32568	1501 aa	Known RBP	0.11	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms