RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YBR032WP38223 100 aa0.55□□□□□ -2.32
ATG38YLR211C ATP17Q06405 101 aa0.54□□□□□ -2.32
ATG38YLR211C YFL041W-AQ3E817 63 aa0.54□□□□□ -2.32
ATG38YLR211C YOR032W-AQ8TGS1 66 aa0.54□□□□□ -2.32
ATG38YLR211C SPI1P40092 148 aa0.53□□□□□ -2.32
ATG38YLR211C EDC1P53080 175 aaPredicted RBP0.53□□□□□ -2.32
ATG38YLR211C YKL018C-AQ3E7A7 99 aa0.53□□□□□ -2.32
ATG38YLR211C TY2B-LR1P0C2J3 1770 aa0.52□□□□□ -2.33
ATG38YLR211C TY2B-FP0CX63 1770 aa0.52□□□□□ -2.33
ATG38YLR211C TY2B-GR2P0CX64 1770 aa0.52□□□□□ -2.33
ATG38YLR211C TY2B-DR2Q03494 1770 aa0.52□□□□□ -2.33
ATG38YLR211C TY2B-OR1Q12113 1770 aa0.52□□□□□ -2.33
ATG38YLR211C TY2B-BQ12491 1770 aa0.52□□□□□ -2.33
ATG38YLR211C TY2B-OR2Q12501 1770 aa0.52□□□□□ -2.33
ATG38YLR211C HKR1P41809 1802 aa0.52□□□□□ -2.33
ATG38YLR211C ERI1P62651 68 aaKnown RBP0.52□□□□□ -2.33
ATG38YLR211C TY1B-JR1P47098 1755 aa0.52□□□□□ -2.33
ATG38YLR211C TY1B-ML2Q03434 1755 aaKnown RBP0.52□□□□□ -2.33
ATG38YLR211C TY1B-ER1Q03612 1755 aa0.52□□□□□ -2.33
ATG38YLR211C TY1B-OLQ12273 1755 aa0.52□□□□□ -2.33
ATG38YLR211C SSS1P35179 80 aa0.51□□□□□ -2.33
ATG38YLR211C ATX1P38636 73 aa0.51□□□□□ -2.33
ATG38YLR211C KOG1P38873 1557 aa0.51□□□□□ -2.33
ATG38YLR211C PAU7P39545 55 aa0.51□□□□□ -2.33
ATG38YLR211C TCB3Q03640 1545 aaKnown RBP0.51□□□□□ -2.33
ATG38YLR211C TY2B-DR3Q07791 1770 aaKnown RBP0.51□□□□□ -2.33
ATG38YLR211C YDR246W-AQ3E763 66 aa0.51□□□□□ -2.33
ATG38YLR211C SCC2Q04002 1493 aa0.5□□□□□ -2.33
ATG38YLR211C SEN1Q00416 2231 aaKnown RBP0.49□□□□□ -2.33
ATG38YLR211C YIL134C-AQ45U18 67 aa0.49□□□□□ -2.33
ATG38YLR211C PMD1P32634 1753 aa0.49□□□□□ -2.33
ATG38YLR211C MON2P48563 1636 aaPredicted RBP0.49□□□□□ -2.33
ATG38YLR211C TAO3P40468 2376 aa0.48□□□□□ -2.33
ATG38YLR211C YGR025WP53216 100 aa0.47□□□□□ -2.33
ATG38YLR211C SSK2P53599 1579 aa0.47□□□□□ -2.33
ATG38YLR211C ARO1P08566 1588 aaKnown RBP0.46□□□□□ -2.34
ATG38YLR211C RPS27AP35997 82 aaKnown RBP0.46□□□□□ -2.34
ATG38YLR211C YBL044WP38194 122 aa0.46□□□□□ -2.34
ATG38YLR211C YBR200W-AQ3E755 54 aa0.46□□□□□ -2.34
ATG38YLR211C VPS15P22219 1454 aa0.46□□□□□ -2.34
ATG38YLR211C DNF1P32660 1571 aa0.45□□□□□ -2.34
ATG38YLR211C THO2P53552 1597 aaKnown RBP0.45□□□□□ -2.34
ATG38YLR211C APC1P53886 1748 aa0.44□□□□□ -2.34
ATG38YLR211C YLR146W-AQ2V2P1 62 aa0.44□□□□□ -2.34
ATG38YLR211C YOR011W-AQ3E807 68 aa0.44□□□□□ -2.34
ATG38YLR211C MMS1Q06211 1407 aa0.44□□□□□ -2.34
ATG38YLR211C SMC4Q12267 1418 aa0.44□□□□□ -2.34
ATG38YLR211C SPT6P23615 1451 aaKnown RBP0.43□□□□□ -2.34
ATG38YLR211C YOR093CQ12275 1648 aa0.43□□□□□ -2.34
ATG38YLR211C DNF2Q12675 1612 aa0.43□□□□□ -2.34
ATG38YLR211C YBL039W-BP0C268 59 aa0.43□□□□□ -2.34
ATG38YLR211C YSY6P38374 65 aa0.43□□□□□ -2.34
ATG38YLR211C YOL131WQ08270 108 aa0.43□□□□□ -2.34
ATG38YLR211C IML1P47170 1584 aa0.43□□□□□ -2.34
ATG38YLR211C IRC20Q06554 1556 aa0.43□□□□□ -2.34
ATG38YLR211C YCF1P39109 1515 aaKnown RBP0.43□□□□□ -2.34
ATG38YLR211C BUD3P25558 1636 aa0.42□□□□□ -2.34
ATG38YLR211C RPO31P04051 1460 aa0.42□□□□□ -2.34
ATG38YLR211C YFR010W-AP0C5N0 62 aa0.42□□□□□ -2.34
ATG38YLR211C YDR182W-AQ3E796 67 aa0.42□□□□□ -2.34
ATG38YLR211C YOR394C-AQ8TGJ0 55 aa0.42□□□□□ -2.34
ATG38YLR211C ULS1Q08562 1619 aa0.42□□□□□ -2.34
ATG38YLR211C MYO4P32492 1471 aa0.41□□□□□ -2.34
ATG38YLR211C RPS30AP0CX33 63 aaKnown RBP0.41□□□□□ -2.34
ATG38YLR211C RPS30BP0CX34 63 aaKnown RBP0.41□□□□□ -2.34
ATG38YLR211C YIL102C-AQ2V2P5 75 aa0.41□□□□□ -2.34
ATG38YLR211C HUB1Q6Q546 73 aa0.41□□□□□ -2.34
ATG38YLR211C SNQ2P32568 1501 aaKnown RBP0.41□□□□□ -2.34
ATG38YLR211C NUP170P38181 1502 aa0.41□□□□□ -2.34
ATG38YLR211C IQG1Q12280 1495 aa0.41□□□□□ -2.34
ATG38YLR211C CDC25P04821 1589 aa0.4□□□□□ -2.34
ATG38YLR211C ATG2P53855 1592 aa0.4□□□□□ -2.34
ATG38YLR211C RKR1Q04781 1562 aa0.4□□□□□ -2.34
ATG38YLR211C HAP1P0CE41 1502 aa0.4□□□□□ -2.35
ATG38YLR211C HIR3P47171 1648 aa0.4□□□□□ -2.35
ATG38YLR211C YCR108CQ3E819 63 aa0.4□□□□□ -2.35
ATG38YLR211C PEP1P32319 1579 aa0.4□□□□□ -2.35
ATG38YLR211C NUM1Q00402 2748 aa0.39□□□□□ -2.35
ATG38YLR211C STU1P38198 1513 aa0.39□□□□□ -2.35
ATG38YLR211C PDR15Q04182 1529 aaKnown RBP0.39□□□□□ -2.35
ATG38YLR211C CHC1P22137 1653 aaKnown RBP0.39□□□□□ -2.35
ATG38YLR211C PDR5P33302 1511 aaKnown RBP0.38□□□□□ -2.35
ATG38YLR211C PDR12Q02785 1511 aa0.38□□□□□ -2.35
ATG38YLR211C TY3B-GQ99315 1547 aa0.38□□□□□ -2.35
ATG38YLR211C TY1B-DR4Q07793 1604 aa0.38□□□□□ -2.35
ATG38YLR211C RRP5Q05022 1729 aaKnown RBP0.38□□□□□ -2.35
ATG38YLR211C FKS3Q04952 1785 aa0.38□□□□□ -2.35
ATG38YLR211C MLP2P40457 1679 aa0.38□□□□□ -2.35
ATG38YLR211C YOL166W-AQ8TGJ1 51 aa0.38□□□□□ -2.35
ATG38YLR211C VMR1P38735 1592 aa0.37□□□□□ -2.35
ATG38YLR211C BCK1Q01389 1478 aa0.37□□□□□ -2.35
ATG38YLR211C TOR1P35169 2470 aa0.37□□□□□ -2.35
ATG38YLR211C YPR117WQ06116 2489 aa0.37□□□□□ -2.35
ATG38YLR211C OLI1P61829 76 aa0.37□□□□□ -2.35
ATG38YLR211C VMA9Q3E7B6 73 aa0.37□□□□□ -2.35
ATG38YLR211C VTH1P40438 1549 aa0.37□□□□□ -2.35
ATG38YLR211C VTH2P40890 1549 aa0.37□□□□□ -2.35
ATG38YLR211C SPO14P36126 1683 aa0.37□□□□□ -2.35
ATG38YLR211C GCN1P33892 2672 aaKnown RBP0.34□□□□□ -2.35
ATG38YLR211C YBT1P32386 1661 aa0.34□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms