RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YMR001C-AQ8TGS9 76 aa-0.88□□□□□ -2.55
CMS1YLR003C TOR1P35169 2470 aa-0.89□□□□□ -2.55
CMS1YLR003C VTH1P40438 1549 aa-0.91□□□□□ -2.56
CMS1YLR003C VTH2P40890 1549 aa-0.91□□□□□ -2.56
CMS1YLR003C ESC1Q03661 1658 aaKnown RBP-0.91□□□□□ -2.56
CMS1YLR003C IRC20Q06554 1556 aa-0.91□□□□□ -2.56
CMS1YLR003C YDL022C-AP0C5L6 82 aa-0.92□□□□□ -2.56
CMS1YLR003C POC4Q12245 148 aaPredicted RBP-0.92□□□□□ -2.56
CMS1YLR003C YKL065W-AQ2V2P2 73 aa-0.92□□□□□ -2.56
CMS1YLR003C YDR182W-AQ3E796 67 aa-0.92□□□□□ -2.56
CMS1YLR003C RPS27AP35997 82 aaKnown RBP-0.93□□□□□ -2.56
CMS1YLR003C YOR105WQ08504 108 aa-0.93□□□□□ -2.56
CMS1YLR003C YSP2Q06681 1438 aa-0.93□□□□□ -2.56
CMS1YLR003C TY1B-NL2Q99337 1749 aaKnown RBP-0.94□□□□□ -2.56
CMS1YLR003C LTE1P07866 1435 aa-0.95□□□□□ -2.56
CMS1YLR003C YKL018C-AQ3E7A7 99 aa-0.95□□□□□ -2.56
CMS1YLR003C SMC4Q12267 1418 aa-0.96□□□□□ -2.56
CMS1YLR003C YOR314WQ12506 109 aa-0.96□□□□□ -2.56
CMS1YLR003C ESP1Q03018 1630 aa-0.97□□□□□ -2.56
CMS1YLR003C SIN3P22579 1536 aa-0.97□□□□□ -2.56
CMS1YLR003C SPO14P36126 1683 aa-0.97□□□□□ -2.57
CMS1YLR003C MMS22Q06164 1454 aa-0.98□□□□□ -2.57
CMS1YLR003C LSM2P38203 95 aaKnown RBP-0.99□□□□□ -2.57
CMS1YLR003C YOR008C-AQ3E7B9 74 aa-1□□□□□ -2.57
CMS1YLR003C KOG1P38873 1557 aa-1□□□□□ -2.57
CMS1YLR003C RPO21P04050 1733 aaKnown RBP-1.01□□□□□ -2.57
CMS1YLR003C MLP1Q02455 1875 aaKnown RBP-1.01□□□□□ -2.57
CMS1YLR003C ATP17Q06405 101 aa-1.03□□□□□ -2.57
CMS1YLR003C YPR145C-AQ2V2P0 78 aa-1.03□□□□□ -2.57
CMS1YLR003C OLI1P61829 76 aa-1.04□□□□□ -2.58
CMS1YLR003C YGL194C-AQ2V2P6 80 aa-1.04□□□□□ -2.58
CMS1YLR003C YGR121W-AQ3E816 71 aa-1.04□□□□□ -2.58
CMS1YLR003C TY3B-GQ99315 1547 aa-1.06□□□□□ -2.58
CMS1YLR003C TOS6P48560 102 aa-1.07□□□□□ -2.58
CMS1YLR003C YOR394C-AQ8TGJ0 55 aa-1.07□□□□□ -2.58
CMS1YLR003C YBR200W-AQ3E755 54 aa-1.08□□□□□ -2.58
CMS1YLR003C CWP2P43497 92 aa-1.09□□□□□ -2.58
CMS1YLR003C SIP18P50263 79 aa-1.09□□□□□ -2.58
CMS1YLR003C QCR9P22289 66 aa-1.1□□□□□ -2.59
CMS1YLR003C SWM2P40342 146 aa-1.1□□□□□ -2.59
CMS1YLR003C YGR035W-AQ45U48 73 aa-1.1□□□□□ -2.59
CMS1YLR003C YOR011W-AQ3E807 68 aa-1.11□□□□□ -2.59
CMS1YLR003C YLR146W-AQ2V2P1 62 aa-1.12□□□□□ -2.59
CMS1YLR003C HAP1P0CE41 1502 aa-1.15□□□□□ -2.59
CMS1YLR003C FMP27Q06179 2628 aa-1.16□□□□□ -2.6
CMS1YLR003C YOR032W-AQ8TGS1 66 aa-1.17□□□□□ -2.6
CMS1YLR003C YBL039W-BP0C268 59 aa-1.18□□□□□ -2.6
CMS1YLR003C ARO1P08566 1588 aaKnown RBP-1.19□□□□□ -2.6
CMS1YLR003C FKS3Q04952 1785 aa-1.23□□□□□ -2.61
CMS1YLR003C PAU7P39545 55 aa-1.24□□□□□ -2.61
CMS1YLR003C YDR119W-AQ2V2P9 66 aa-1.25□□□□□ -2.61
CMS1YLR003C RPS27BP38711 82 aa-1.26□□□□□ -2.61
CMS1YLR003C DYN1P36022 4092 aa-1.27□□□□□ -2.61
CMS1YLR003C TIM12P32830 109 aa-1.3□□□□□ -2.62
CMS1YLR003C SPI1P40092 148 aa-1.32□□□□□ -2.62
CMS1YLR003C YDR524C-BQ3E6R4 66 aa-1.32□□□□□ -2.62
CMS1YLR003C TOR2P32600 2474 aaKnown RBP-1.33□□□□□ -2.62
CMS1YLR003C SSS1P35179 80 aa-1.33□□□□□ -2.62
CMS1YLR003C HUB1Q6Q546 73 aa-1.33□□□□□ -2.62
CMS1YLR003C YPR117WQ06116 2489 aa-1.33□□□□□ -2.62
CMS1YLR003C DOP1Q03921 1698 aa-1.34□□□□□ -2.62
CMS1YLR003C IML1P47170 1584 aa-1.36□□□□□ -2.63
CMS1YLR003C DNF2Q12675 1612 aa-1.37□□□□□ -2.63
CMS1YLR003C ERI1P62651 68 aaKnown RBP-1.37□□□□□ -2.63
CMS1YLR003C UFD4P33202 1483 aa-1.38□□□□□ -2.63
CMS1YLR003C TEL1P38110 2787 aa-1.39□□□□□ -2.63
CMS1YLR003C YHR050W-AQ05451 56 aa-1.39□□□□□ -2.63
CMS1YLR003C COA2Q3E823 68 aa-1.4□□□□□ -2.63
CMS1YLR003C BCK1Q01389 1478 aa-1.41□□□□□ -2.63
CMS1YLR003C YGR146C-AQ8TGT9 53 aa-1.41□□□□□ -2.64
CMS1YLR003C YBR230W-AQ3E762 66 aa-1.42□□□□□ -2.64
CMS1YLR003C VPS15P22219 1454 aa-1.43□□□□□ -2.64
CMS1YLR003C MEC1P38111 2368 aa-1.43□□□□□ -2.64
CMS1YLR003C YLL006W-AQ3E814 58 aa-1.43□□□□□ -2.64
CMS1YLR003C RRP5Q05022 1729 aaKnown RBP-1.44□□□□□ -2.64
CMS1YLR003C PDR12Q02785 1511 aa-1.45□□□□□ -2.64
CMS1YLR003C IQG1Q12280 1495 aa-1.45□□□□□ -2.64
CMS1YLR003C RPO31P04051 1460 aa-1.46□□□□□ -2.64
CMS1YLR003C MDN1Q12019 4910 aaKnown RBP-1.46□□□□□ -2.64
CMS1YLR003C SKI3P17883 1432 aaKnown RBP-1.47□□□□□ -2.64
CMS1YLR003C NUP159P40477 1460 aa-1.48□□□□□ -2.65
CMS1YLR003C YHR213W-AQ8TGT4 77 aa-1.48□□□□□ -2.65
CMS1YLR003C VMR1P38735 1592 aa-1.49□□□□□ -2.65
CMS1YLR003C RPS30AP0CX33 63 aaKnown RBP-1.49□□□□□ -2.65
CMS1YLR003C RPS30BP0CX34 63 aaKnown RBP-1.49□□□□□ -2.65
CMS1YLR003C YFL041W-AQ3E817 63 aa-1.51□□□□□ -2.65
CMS1YLR003C YGL258W-AQ3E740 77 aa-1.52□□□□□ -2.65
CMS1YLR003C GCN1P33892 2672 aaKnown RBP-1.55□□□□□ -2.66
CMS1YLR003C YOR072W-BQ3E832 53 aa-1.58□□□□□ -2.66
CMS1YLR003C PDR15Q04182 1529 aaKnown RBP-1.58□□□□□ -2.66
CMS1YLR003C SCC2Q04002 1493 aa-1.58□□□□□ -2.66
CMS1YLR003C DNF1P32660 1571 aa-1.59□□□□□ -2.66
CMS1YLR003C YSY6P38374 65 aa-1.59□□□□□ -2.66
CMS1YLR003C YLR157W-DP0CE99 70 aa-1.6□□□□□ -2.67
CMS1YLR003C YOL166W-AQ8TGJ1 51 aa-1.6□□□□□ -2.67
CMS1YLR003C TY1B-DR4Q07793 1604 aa-1.6□□□□□ -2.67
CMS1YLR003C YOL131WQ08270 108 aa-1.65□□□□□ -2.67
CMS1YLR003C SNQ2P32568 1501 aaKnown RBP-1.66□□□□□ -2.67
CMS1YLR003C FIG2P25653 1609 aa-1.66□□□□□ -2.67
CMS1YLR003C PAI3P01094 68 aa-1.67□□□□□ -2.68
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms