RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C YPR013CQ12145 317 aa1.07□□□□□ -2.24
RPF2YKR081C YOR034C-AQ3E735 80 aa1.07□□□□□ -2.24
RPF2YKR081C YMR030W-AQ3E760 96 aa1.07□□□□□ -2.24
RPF2YKR081C MHF2Q3E829 80 aa1.07□□□□□ -2.24
RPF2YKR081C NOP10Q6Q547 58 aaPredicted RBP1.07□□□□□ -2.24
RPF2YKR081C STT4P37297 1900 aa1.07□□□□□ -2.24
RPF2YKR081C URB1P34241 1764 aaKnown RBP1.06□□□□□ -2.24
RPF2YKR081C RIM15P43565 1770 aa1.06□□□□□ -2.24
RPF2YKR081C GCN1P33892 2672 aaKnown RBP1.06□□□□□ -2.24
RPF2YKR081C YNL190WP53872 204 aa1.06□□□□□ -2.24
RPF2YKR081C YLR285C-AQ3E771 56 aa1.06□□□□□ -2.24
RPF2YKR081C YCR095W-AQ3E787 52 aa1.06□□□□□ -2.24
RPF2YKR081C BUD3P25558 1636 aa1.05□□□□□ -2.24
RPF2YKR081C COX8P04039 78 aa1.05□□□□□ -2.24
RPF2YKR081C RPS30AP0CX33 63 aaKnown RBP1.05□□□□□ -2.24
RPF2YKR081C RPS30BP0CX34 63 aaKnown RBP1.05□□□□□ -2.24
RPF2YKR081C POR2P40478 281 aa1.05□□□□□ -2.24
RPF2YKR081C IRC21Q04772 201 aa1.05□□□□□ -2.24
RPF2YKR081C YDR010CQ12426 110 aa1.05□□□□□ -2.24
RPF2YKR081C COA3Q3E7B2 85 aa1.05□□□□□ -2.24
RPF2YKR081C COA2Q3E823 68 aa1.05□□□□□ -2.24
RPF2YKR081C YOL166W-AQ8TGJ1 51 aa1.05□□□□□ -2.24
RPF2YKR081C CCW14O13547 238 aa1.04□□□□□ -2.24
RPF2YKR081C YBR027CP38220 110 aa1.04□□□□□ -2.24
RPF2YKR081C YHL037CP38733 133 aa1.04□□□□□ -2.24
RPF2YKR081C AIM19P40502 157 aa1.04□□□□□ -2.24
RPF2YKR081C MRX7P53869 86 aa1.04□□□□□ -2.24
RPF2YKR081C ATP19P81451 68 aa1.04□□□□□ -2.24
RPF2YKR081C CCW12Q12127 133 aa1.04□□□□□ -2.24
RPF2YKR081C VMR1P38735 1592 aa1.04□□□□□ -2.24
RPF2YKR081C YLR255CO13574 117 aa1.03□□□□□ -2.24
RPF2YKR081C MRPS12P53732 153 aa1.03□□□□□ -2.24
RPF2YKR081C SNA2P56508 79 aa1.03□□□□□ -2.24
RPF2YKR081C YDR210WQ03482 75 aa1.03□□□□□ -2.24
RPF2YKR081C YNL042W-BQ3E7Z2 85 aa1.03□□□□□ -2.24
RPF2YKR081C RPS11AP0CX47 156 aaKnown RBP1.02□□□□□ -2.25
RPF2YKR081C RPS11BP0CX48 156 aaKnown RBP1.02□□□□□ -2.25
RPF2YKR081C FIG2P25653 1609 aa1.02□□□□□ -2.25
RPF2YKR081C YEL014CP39999 101 aa1.02□□□□□ -2.25
RPF2YKR081C YKL065W-AQ2V2P2 73 aa1.02□□□□□ -2.25
RPF2YKR081C FMP27Q06179 2628 aa1.01□□□□□ -2.25
RPF2YKR081C PAU7P39545 55 aa1.01□□□□□ -2.25
RPF2YKR081C BSC4P53841 131 aa1.01□□□□□ -2.25
RPF2YKR081C MGR2Q02889 113 aa1.01□□□□□ -2.25
RPF2YKR081C SHU1P38751 150 aa1□□□□□ -2.25
RPF2YKR081C YMR321CQ04898 105 aa1□□□□□ -2.25
RPF2YKR081C YDR182W-AQ3E796 67 aa1□□□□□ -2.25
RPF2YKR081C CDC39P25655 2108 aaKnown RBP1□□□□□ -2.25
RPF2YKR081C HKR1P41809 1802 aa0.99□□□□□ -2.25
RPF2YKR081C BRR2P32639 2163 aaKnown RBP0.99□□□□□ -2.25
RPF2YKR081C YGL014C-AP0C5N1 53 aa0.99□□□□□ -2.25
RPF2YKR081C NUP192P47054 1683 aa0.98□□□□□ -2.25
RPF2YKR081C YSF3P0C074 85 aaPredicted RBP0.98□□□□□ -2.25
RPF2YKR081C RPL38P49167 78 aaKnown RBP0.98□□□□□ -2.25
RPF2YKR081C TOM7P53507 60 aa0.98□□□□□ -2.25
RPF2YKR081C YMR122W-AQ3E842 84 aa0.98□□□□□ -2.25
RPF2YKR081C TAR1Q8TGM6 124 aa0.98□□□□□ -2.25
RPF2YKR081C TAO3P40468 2376 aa0.97□□□□□ -2.25
RPF2YKR081C COX9P07255 59 aa0.97□□□□□ -2.25
RPF2YKR081C ATP17Q06405 101 aa0.97□□□□□ -2.25
RPF2YKR081C VAM10Q08474 114 aa0.97□□□□□ -2.25
RPF2YKR081C IRA1P18963 3092 aa0.96□□□□□ -2.26
RPF2YKR081C YCR001WP25347 104 aa0.96□□□□□ -2.26
RPF2YKR081C YMR141CP40211 102 aa0.96□□□□□ -2.26
RPF2YKR081C YIL102CP40488 101 aa0.96□□□□□ -2.26
RPF2YKR081C MVB12P42939 101 aa0.96□□□□□ -2.26
RPF2YKR081C YNL122CP53921 115 aaPredicted RBP0.96□□□□□ -2.26
RPF2YKR081C SGF11Q03067 99 aa0.96□□□□□ -2.26
RPF2YKR081C YCL048W-AQ2V2Q2 79 aa0.96□□□□□ -2.26
RPF2YKR081C HUG1Q6Q5K6 68 aa0.96□□□□□ -2.26
RPF2YKR081C PRP8P33334 2413 aaKnown RBP0.96□□□□□ -2.26
RPF2YKR081C UTP20P35194 2493 aaKnown RBP0.95□□□□□ -2.26
RPF2YKR081C YLR157W-DP0CE99 70 aa0.95□□□□□ -2.26
RPF2YKR081C YJR107C-AP0CT86 78 aa0.95□□□□□ -2.26
RPF2YKR081C YBR201C-AQ2V2Q3 67 aa0.95□□□□□ -2.26
RPF2YKR081C YMR001C-AQ8TGS9 76 aa0.95□□□□□ -2.26
RPF2YKR081C Q0032Q9ZZX7 96 aa0.95□□□□□ -2.26
RPF2YKR081C BLM10P43583 2143 aa0.95□□□□□ -2.26
RPF2YKR081C YPR010C-AA5Z2X5 72 aa0.94□□□□□ -2.26
RPF2YKR081C RPL33AP05744 107 aaKnown RBP0.94□□□□□ -2.26
RPF2YKR081C RPL43AP0CX25 92 aaKnown RBP0.94□□□□□ -2.26
RPF2YKR081C RPL43BP0CX26 92 aa0.94□□□□□ -2.26
RPF2YKR081C LCL1Q02786 101 aa0.94□□□□□ -2.26
RPF2YKR081C YOR072WQ08486 104 aa0.94□□□□□ -2.26
RPF2YKR081C IRA2P19158 3079 aa0.94□□□□□ -2.26
RPF2YKR081C TRA1P38811 3744 aa0.93□□□□□ -2.26
RPF2YKR081C YBL039W-BP0C268 59 aa0.93□□□□□ -2.26
RPF2YKR081C YOL013W-AP0C272 63 aaPredicted RBP0.93□□□□□ -2.26
RPF2YKR081C YFR009W-AP0C5M9 85 aa0.93□□□□□ -2.26
RPF2YKR081C TOS6P48560 102 aa0.93□□□□□ -2.26
RPF2YKR081C YGR025WP53216 100 aa0.93□□□□□ -2.26
RPF2YKR081C ATP18P81450 59 aa0.93□□□□□ -2.26
RPF2YKR081C SDH6Q3E785 79 aa0.93□□□□□ -2.26
RPF2YKR081C HUB1Q6Q546 73 aa0.93□□□□□ -2.26
RPF2YKR081C YJR128WP47162 119 aa0.92□□□□□ -2.26
RPF2YKR081C YBR200W-AQ3E755 54 aa0.92□□□□□ -2.26
RPF2YKR081C YGL041C-BQ3E750 60 aa0.91□□□□□ -2.26
RPF2YKR081C YGR240C-AQ3E786 66 aa0.91□□□□□ -2.26
RPF2YKR081C YPR108W-AQ3E7B3 70 aa0.91□□□□□ -2.26
RPF2YKR081C YOR008C-AQ3E7B9 74 aa0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms