RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W PAU23Q07987 124 aa-0.31□□□□□ -2.46
VMA21YGR105W FYV7Q12247 151 aa-0.31□□□□□ -2.46
VMA21YGR105W PAU17Q12370 124 aa-0.31□□□□□ -2.46
VMA21YGR105W IRA2P19158 3079 aa-0.31□□□□□ -2.46
VMA21YGR105W SWR1Q05471 1514 aa-0.32□□□□□ -2.46
VMA21YGR105W GDB1Q06625 1536 aa-0.32□□□□□ -2.46
VMA21YGR105W VPS13Q07878 3144 aa-0.32□□□□□ -2.46
VMA21YGR105W POL1P13382 1468 aa-0.32□□□□□ -2.46
VMA21YGR105W RRT15Q3E811 62 aa-0.32□□□□□ -2.46
VMA21YGR105W VTH1P40438 1549 aa-0.33□□□□□ -2.46
VMA21YGR105W VTH2P40890 1549 aa-0.33□□□□□ -2.46
VMA21YGR105W YDR042CQ03205 200 aa-0.33□□□□□ -2.46
VMA21YGR105W SCP1Q08873 200 aa-0.33□□□□□ -2.46
VMA21YGR105W NOP10Q6Q547 58 aaPredicted RBP-0.33□□□□□ -2.46
VMA21YGR105W TOM1Q03280 3268 aa-0.34□□□□□ -2.46
VMA21YGR105W LSM2P38203 95 aaKnown RBP-0.34□□□□□ -2.46
VMA21YGR105W KOG1P38873 1557 aa-0.34□□□□□ -2.46
VMA21YGR105W SIP18P50263 79 aa-0.34□□□□□ -2.46
VMA21YGR105W OLI1P61829 76 aa-0.34□□□□□ -2.46
VMA21YGR105W RPO21P04050 1733 aaKnown RBP-0.35□□□□□ -2.47
VMA21YGR105W IRC20Q06554 1556 aa-0.35□□□□□ -2.47
VMA21YGR105W SMC4Q12267 1418 aa-0.35□□□□□ -2.47
VMA21YGR105W TOS6P48560 102 aa-0.35□□□□□ -2.47
VMA21YGR105W POC4Q12245 148 aaPredicted RBP-0.35□□□□□ -2.47
VMA21YGR105W YOR343CQ12484 108 aa-0.35□□□□□ -2.47
VMA21YGR105W YCL001W-BQ96VH2 84 aa-0.35□□□□□ -2.47
VMA21YGR105W YHR050W-AQ05451 56 aa-0.36□□□□□ -2.47
VMA21YGR105W YOR105WQ08504 108 aa-0.36□□□□□ -2.47
VMA21YGR105W YPL225WQ08971 146 aaKnown RBP-0.36□□□□□ -2.47
VMA21YGR105W YKL065W-AQ2V2P2 73 aa-0.36□□□□□ -2.47
VMA21YGR105W YIL156W-BQ2V2P4 73 aa-0.36□□□□□ -2.47
VMA21YGR105W PDR10P51533 1564 aa-0.36□□□□□ -2.47
VMA21YGR105W RPS27AP35997 82 aaKnown RBP-0.37□□□□□ -2.47
VMA21YGR105W ZEO1Q08245 113 aa-0.37□□□□□ -2.47
VMA21YGR105W YLR146W-AQ2V2P1 62 aa-0.37□□□□□ -2.47
VMA21YGR105W COA2Q3E823 68 aa-0.37□□□□□ -2.47
VMA21YGR105W MLP1Q02455 1875 aaKnown RBP-0.37□□□□□ -2.47
VMA21YGR105W TY3B-GQ99315 1547 aa-0.38□□□□□ -2.47
VMA21YGR105W YOR314WQ12506 109 aa-0.38□□□□□ -2.47
VMA21YGR105W YOR394C-AQ8TGJ0 55 aa-0.38□□□□□ -2.47
VMA21YGR105W YMR082CQ04276 118 aa-0.39□□□□□ -2.47
VMA21YGR105W ATP17Q06405 101 aa-0.39□□□□□ -2.47
VMA21YGR105W YMR175W-AQ3E766 64 aa-0.39□□□□□ -2.47
VMA21YGR105W YOR011W-AQ3E807 68 aa-0.39□□□□□ -2.47
VMA21YGR105W SIN3P22579 1536 aa-0.39□□□□□ -2.47
VMA21YGR105W FKS3Q04952 1785 aa-0.4□□□□□ -2.47
VMA21YGR105W YDL022C-AP0C5L6 82 aa-0.4□□□□□ -2.47
VMA21YGR105W YDR524C-BQ3E6R4 66 aa-0.4□□□□□ -2.47
VMA21YGR105W YBR200W-AQ3E755 54 aa-0.4□□□□□ -2.47
VMA21YGR105W MMS22Q06164 1454 aa-0.41□□□□□ -2.47
VMA21YGR105W YBL039W-BP0C268 59 aa-0.41□□□□□ -2.48
VMA21YGR105W ESC1Q03661 1658 aaKnown RBP-0.42□□□□□ -2.48
VMA21YGR105W QCR9P22289 66 aa-0.42□□□□□ -2.48
VMA21YGR105W YCR075W-AQ3E830 75 aa-0.42□□□□□ -2.48
VMA21YGR105W ESP1Q03018 1630 aa-0.42□□□□□ -2.48
VMA21YGR105W LTE1P07866 1435 aa-0.43□□□□□ -2.48
VMA21YGR105W SWM2P40342 146 aa-0.43□□□□□ -2.48
VMA21YGR105W YPR145C-AQ2V2P0 78 aa-0.43□□□□□ -2.48
VMA21YGR105W YDR119W-AQ2V2P9 66 aa-0.43□□□□□ -2.48
VMA21YGR105W HAP1P0CE41 1502 aa-0.43□□□□□ -2.48
VMA21YGR105W PAU7P39545 55 aa-0.44□□□□□ -2.48
VMA21YGR105W YGL258W-AQ3E740 77 aa-0.44□□□□□ -2.48
VMA21YGR105W YLL006W-AQ3E814 58 aa-0.44□□□□□ -2.48
VMA21YGR105W YGR121W-AQ3E816 71 aa-0.44□□□□□ -2.48
VMA21YGR105W HUB1Q6Q546 73 aa-0.44□□□□□ -2.48
VMA21YGR105W VPS15P22219 1454 aa-0.44□□□□□ -2.48
VMA21YGR105W YSP2Q06681 1438 aa-0.45□□□□□ -2.48
VMA21YGR105W CWP2P43497 92 aa-0.45□□□□□ -2.48
VMA21YGR105W YBR230W-AQ3E762 66 aa-0.45□□□□□ -2.48
VMA21YGR105W YGR035W-AQ45U48 73 aa-0.45□□□□□ -2.48
VMA21YGR105W YGR146C-AQ8TGT9 53 aa-0.45□□□□□ -2.48
VMA21YGR105W SSS1P35179 80 aa-0.46□□□□□ -2.48
VMA21YGR105W RPS27BP38711 82 aa-0.46□□□□□ -2.48
VMA21YGR105W YOR032W-AQ8TGS1 66 aa-0.46□□□□□ -2.48
VMA21YGR105W ARO1P08566 1588 aaKnown RBP-0.47□□□□□ -2.48
VMA21YGR105W YGL194C-AQ2V2P6 80 aa-0.47□□□□□ -2.48
VMA21YGR105W YOR072W-BQ3E832 53 aa-0.47□□□□□ -2.48
VMA21YGR105W RRP5Q05022 1729 aaKnown RBP-0.48□□□□□ -2.49
VMA21YGR105W IML1P47170 1584 aa-0.49□□□□□ -2.49
VMA21YGR105W PDR12Q02785 1511 aa-0.49□□□□□ -2.49
VMA21YGR105W DNF1P32660 1571 aa-0.49□□□□□ -2.49
VMA21YGR105W TIM12P32830 109 aa-0.5□□□□□ -2.49
VMA21YGR105W SPI1P40092 148 aa-0.5□□□□□ -2.49
VMA21YGR105W FIG2P25653 1609 aa-0.5□□□□□ -2.49
VMA21YGR105W DNF2Q12675 1612 aa-0.5□□□□□ -2.49
VMA21YGR105W TY1B-DR4Q07793 1604 aa-0.52□□□□□ -2.49
VMA21YGR105W BCK1Q01389 1478 aa-0.52□□□□□ -2.49
VMA21YGR105W ERI1P62651 68 aaKnown RBP-0.52□□□□□ -2.49
VMA21YGR105W DOP1Q03921 1698 aa-0.53□□□□□ -2.49
VMA21YGR105W UFD4P33202 1483 aa-0.53□□□□□ -2.49
VMA21YGR105W IQG1Q12280 1495 aa-0.53□□□□□ -2.49
VMA21YGR105W RPS30AP0CX33 63 aaKnown RBP-0.53□□□□□ -2.49
VMA21YGR105W RPS30BP0CX34 63 aaKnown RBP-0.53□□□□□ -2.49
VMA21YGR105W VMR1P38735 1592 aa-0.53□□□□□ -2.49
VMA21YGR105W YLR157W-DP0CE99 70 aa-0.54□□□□□ -2.5
VMA21YGR105W CUP1-1P0CX80 61 aa-0.54□□□□□ -2.5
VMA21YGR105W CUP1-2P0CX81 61 aa-0.54□□□□□ -2.5
VMA21YGR105W YOR192C-CQ3E736 78 aa-0.54□□□□□ -2.5
VMA21YGR105W SNQ2P32568 1501 aaKnown RBP-0.54□□□□□ -2.5
VMA21YGR105W PDR15Q04182 1529 aaKnown RBP-0.54□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms