RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RPO21P04050 1733 aaKnown RBP1.03□□□□□ -2.24
SEC4YFL005W PAU7P39545 55 aa1.03□□□□□ -2.24
SEC4YFL005W YIL156W-BQ2V2P4 73 aa1.03□□□□□ -2.24
SEC4YFL005W RPL43AP0CX25 92 aaKnown RBP1.02□□□□□ -2.25
SEC4YFL005W RPL43BP0CX26 92 aa1.02□□□□□ -2.25
SEC4YFL005W SPO14P36126 1683 aa1.02□□□□□ -2.25
SEC4YFL005W YNL198CP40166 100 aa1.02□□□□□ -2.25
SEC4YFL005W YGR035W-AQ45U48 73 aa1.02□□□□□ -2.25
SEC4YFL005W SGF11Q03067 99 aa1.01□□□□□ -2.25
SEC4YFL005W ATP17Q06405 101 aa1.01□□□□□ -2.25
SEC4YFL005W VMA9Q3E7B6 73 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-LR1P0C2J3 1770 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-FP0CX63 1770 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-GR2P0CX64 1770 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-DR2Q03494 1770 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-OR1Q12113 1770 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-BQ12491 1770 aa1.01□□□□□ -2.25
SEC4YFL005W TY2B-OR2Q12501 1770 aa1.01□□□□□ -2.25
SEC4YFL005W KOG1P38873 1557 aa1□□□□□ -2.25
SEC4YFL005W TIM12P32830 109 aa1□□□□□ -2.25
SEC4YFL005W YBR032WP38223 100 aa1□□□□□ -2.25
SEC4YFL005W YOL131WQ08270 108 aa1□□□□□ -2.25
SEC4YFL005W SDH6Q3E785 79 aa1□□□□□ -2.25
SEC4YFL005W HUB1Q6Q546 73 aa1□□□□□ -2.25
SEC4YFL005W PDR12Q02785 1511 aa0.99□□□□□ -2.25
SEC4YFL005W BCK1Q01389 1478 aa0.99□□□□□ -2.25
SEC4YFL005W TY2B-DR3Q07791 1770 aaKnown RBP0.99□□□□□ -2.25
SEC4YFL005W YFR010W-AP0C5N0 62 aa0.99□□□□□ -2.25
SEC4YFL005W YSY6P38374 65 aa0.99□□□□□ -2.25
SEC4YFL005W YIL102C-AQ2V2P5 75 aa0.99□□□□□ -2.25
SEC4YFL005W YDR182W-AQ3E796 67 aa0.98□□□□□ -2.25
SEC4YFL005W YPR108W-AQ3E7B3 70 aa0.98□□□□□ -2.25
SEC4YFL005W ARO1P08566 1588 aaKnown RBP0.98□□□□□ -2.25
SEC4YFL005W HKR1P41809 1802 aa0.98□□□□□ -2.25
SEC4YFL005W YDL022C-AP0C5L6 82 aa0.97□□□□□ -2.25
SEC4YFL005W EDC1P53080 175 aaPredicted RBP0.97□□□□□ -2.25
SEC4YFL005W ERI1P62651 68 aaKnown RBP0.97□□□□□ -2.25
SEC4YFL005W PDR5P33302 1511 aaKnown RBP0.97□□□□□ -2.25
SEC4YFL005W MMS1Q06211 1407 aa0.97□□□□□ -2.25
SEC4YFL005W RPC10P40422 70 aa0.96□□□□□ -2.26
SEC4YFL005W YLR307C-AQ3E825 87 aa0.96□□□□□ -2.26
SEC4YFL005W DNF2Q12675 1612 aa0.96□□□□□ -2.26
SEC4YFL005W YLR157W-EP0CF00 54 aa0.95□□□□□ -2.26
SEC4YFL005W YJR107C-AP0CT86 78 aa0.95□□□□□ -2.26
SEC4YFL005W AUA1P32450 94 aa0.95□□□□□ -2.26
SEC4YFL005W TY1B-DR4Q07793 1604 aa0.94□□□□□ -2.26
SEC4YFL005W VMR1P38735 1592 aa0.94□□□□□ -2.26
SEC4YFL005W TY3B-GQ99315 1547 aa0.94□□□□□ -2.26
SEC4YFL005W SNF2P22082 1703 aa0.93□□□□□ -2.26
SEC4YFL005W YNL190WP53872 204 aa0.93□□□□□ -2.26
SEC4YFL005W YLR146W-AQ2V2P1 62 aa0.93□□□□□ -2.26
SEC4YFL005W YKL023C-AQ2V2P3 75 aa0.93□□□□□ -2.26
SEC4YFL005W YDR246W-AQ3E763 66 aa0.93□□□□□ -2.26
SEC4YFL005W YCF1P39109 1515 aaKnown RBP0.93□□□□□ -2.26
SEC4YFL005W YIL134C-AQ45U18 67 aa0.92□□□□□ -2.26
SEC4YFL005W YOR032W-AQ8TGS1 66 aa0.92□□□□□ -2.26
SEC4YFL005W SNQ2P32568 1501 aaKnown RBP0.91□□□□□ -2.26
SEC4YFL005W YKL018C-AQ3E7A7 99 aa0.91□□□□□ -2.26
SEC4YFL005W YOR011W-AQ3E807 68 aa0.91□□□□□ -2.26
SEC4YFL005W YBT1P32386 1661 aa0.91□□□□□ -2.26
SEC4YFL005W YOL164W-AQ3E7A5 60 aa0.9□□□□□ -2.27
SEC4YFL005W PRP8P33334 2413 aaKnown RBP0.9□□□□□ -2.27
SEC4YFL005W SSK2P53599 1579 aa0.9□□□□□ -2.27
SEC4YFL005W USO1P25386 1790 aa0.9□□□□□ -2.27
SEC4YFL005W VTH1P40438 1549 aa0.89□□□□□ -2.27
SEC4YFL005W VTH2P40890 1549 aa0.89□□□□□ -2.27
SEC4YFL005W RPS30AP0CX33 63 aaKnown RBP0.89□□□□□ -2.27
SEC4YFL005W RPS30BP0CX34 63 aaKnown RBP0.89□□□□□ -2.27
SEC4YFL005W YGR025WP53216 100 aa0.89□□□□□ -2.27
SEC4YFL005W OLI1P61829 76 aa0.89□□□□□ -2.27
SEC4YFL005W IRC20Q06554 1556 aa0.88□□□□□ -2.27
SEC4YFL005W SPT6P23615 1451 aaKnown RBP0.88□□□□□ -2.27
SEC4YFL005W YBL039W-BP0C268 59 aa0.88□□□□□ -2.27
SEC4YFL005W PEP1P32319 1579 aa0.87□□□□□ -2.27
SEC4YFL005W SEN1Q00416 2231 aaKnown RBP0.87□□□□□ -2.27
SEC4YFL005W YBR200W-AQ3E755 54 aa0.87□□□□□ -2.27
SEC4YFL005W NUP188P52593 1655 aaKnown RBP0.86□□□□□ -2.27
SEC4YFL005W RPS29BP41058 56 aaKnown RBP0.86□□□□□ -2.27
SEC4YFL005W YOR394C-AQ8TGJ0 55 aa0.86□□□□□ -2.27
SEC4YFL005W YOL166W-AQ8TGJ1 51 aa0.86□□□□□ -2.27
SEC4YFL005W CDC25P04821 1589 aa0.86□□□□□ -2.27
SEC4YFL005W HIR3P47171 1648 aa0.86□□□□□ -2.27
SEC4YFL005W YFR009W-AP0C5M9 85 aa0.85□□□□□ -2.27
SEC4YFL005W YBR016WP38216 128 aa0.85□□□□□ -2.27
SEC4YFL005W YMR001C-AQ8TGS9 76 aa0.85□□□□□ -2.27
SEC4YFL005W TAO3P40468 2376 aa0.84□□□□□ -2.27
SEC4YFL005W YBR230W-AQ3E762 66 aa0.84□□□□□ -2.27
SEC4YFL005W PDR15Q04182 1529 aaKnown RBP0.84□□□□□ -2.28
SEC4YFL005W THO2P53552 1597 aaKnown RBP0.83□□□□□ -2.28
SEC4YFL005W ATG2P53855 1592 aa0.83□□□□□ -2.28
SEC4YFL005W ULS1Q08562 1619 aa0.83□□□□□ -2.28
SEC4YFL005W YLR157W-DP0CE99 70 aa0.82□□□□□ -2.28
SEC4YFL005W YOR093CQ12275 1648 aa0.82□□□□□ -2.28
SEC4YFL005W RPS27AP35997 82 aaKnown RBP0.81□□□□□ -2.28
SEC4YFL005W HAP1P0CE41 1502 aa0.79□□□□□ -2.28
SEC4YFL005W NUP192P47054 1683 aa0.79□□□□□ -2.28
SEC4YFL005W YBL044WP38194 122 aa0.79□□□□□ -2.28
SEC4YFL005W RKR1Q04781 1562 aa0.79□□□□□ -2.28
SEC4YFL005W YOR008C-AQ3E7B9 74 aa0.78□□□□□ -2.28
SEC4YFL005W NUM1Q00402 2748 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms