RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YPR145C-AQ2V2P0 78 aa-0.28□□□□□ -2.45
VAB2YEL005C YSP2Q06681 1438 aa-0.3□□□□□ -2.46
VAB2YEL005C SMC4Q12267 1418 aa-0.3□□□□□ -2.46
VAB2YEL005C YDL022C-AP0C5L6 82 aa-0.3□□□□□ -2.46
VAB2YEL005C OLI1P61829 76 aa-0.3□□□□□ -2.46
VAB2YEL005C YKL018C-AQ3E7A7 99 aa-0.3□□□□□ -2.46
VAB2YEL005C LSM2P38203 95 aaKnown RBP-0.31□□□□□ -2.46
VAB2YEL005C TOR2P32600 2474 aaKnown RBP-0.31□□□□□ -2.46
VAB2YEL005C SIN3P22579 1536 aa-0.32□□□□□ -2.46
VAB2YEL005C ATP17Q06405 101 aa-0.32□□□□□ -2.46
VAB2YEL005C YLR146W-AQ2V2P1 62 aa-0.32□□□□□ -2.46
VAB2YEL005C YDR182W-AQ3E796 67 aa-0.32□□□□□ -2.46
VAB2YEL005C YOR008C-AQ3E7B9 74 aa-0.32□□□□□ -2.46
VAB2YEL005C GCN1P33892 2672 aaKnown RBP-0.33□□□□□ -2.46
VAB2YEL005C FMP27Q06179 2628 aa-0.34□□□□□ -2.46
VAB2YEL005C TY2B-CP25384 1770 aa-0.34□□□□□ -2.46
VAB2YEL005C TY2B-DR1Q12472 1770 aa-0.34□□□□□ -2.46
VAB2YEL005C QCR9P22289 66 aa-0.34□□□□□ -2.46
VAB2YEL005C SWM2P40342 146 aa-0.35□□□□□ -2.47
VAB2YEL005C SIP18P50263 79 aa-0.35□□□□□ -2.47
VAB2YEL005C MLP1Q02455 1875 aaKnown RBP-0.35□□□□□ -2.47
VAB2YEL005C TY2B-LR1P0C2J3 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TY2B-FP0CX63 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TY2B-GR2P0CX64 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TY2B-DR2Q03494 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TY2B-DR3Q07791 1770 aaKnown RBP-0.36□□□□□ -2.47
VAB2YEL005C TY2B-OR1Q12113 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TY2B-BQ12491 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TY2B-OR2Q12501 1770 aa-0.36□□□□□ -2.47
VAB2YEL005C TOR1P35169 2470 aa-0.36□□□□□ -2.47
VAB2YEL005C YPR117WQ06116 2489 aa-0.37□□□□□ -2.47
VAB2YEL005C RPS27AP35997 82 aaKnown RBP-0.37□□□□□ -2.47
VAB2YEL005C KOG1P38873 1557 aa-0.37□□□□□ -2.47
VAB2YEL005C IRC20Q06554 1556 aa-0.37□□□□□ -2.47
VAB2YEL005C ESP1Q03018 1630 aa-0.38□□□□□ -2.47
VAB2YEL005C YGR121W-AQ3E816 71 aa-0.38□□□□□ -2.47
VAB2YEL005C VTH1P40438 1549 aa-0.4□□□□□ -2.47
VAB2YEL005C VTH2P40890 1549 aa-0.4□□□□□ -2.47
VAB2YEL005C YOR394C-AQ8TGJ0 55 aa-0.41□□□□□ -2.48
VAB2YEL005C TEL1P38110 2787 aa-0.42□□□□□ -2.48
VAB2YEL005C YBR200W-AQ3E755 54 aa-0.42□□□□□ -2.48
VAB2YEL005C TY1B-NL2Q99337 1749 aaKnown RBP-0.43□□□□□ -2.48
VAB2YEL005C YOR011W-AQ3E807 68 aa-0.43□□□□□ -2.48
VAB2YEL005C YGR035W-AQ45U48 73 aa-0.43□□□□□ -2.48
VAB2YEL005C SKI3P17883 1432 aaKnown RBP-0.45□□□□□ -2.48
VAB2YEL005C PAU7P39545 55 aa-0.45□□□□□ -2.48
VAB2YEL005C YBL039W-BP0C268 59 aa-0.46□□□□□ -2.48
VAB2YEL005C TOS6P48560 102 aa-0.46□□□□□ -2.48
VAB2YEL005C YOR032W-AQ8TGS1 66 aa-0.46□□□□□ -2.48
VAB2YEL005C SPO14P36126 1683 aa-0.49□□□□□ -2.49
VAB2YEL005C MDN1Q12019 4910 aaKnown RBP-0.5□□□□□ -2.49
VAB2YEL005C TY3B-GQ99315 1547 aa-0.51□□□□□ -2.49
VAB2YEL005C TIM12P32830 109 aa-0.52□□□□□ -2.49
VAB2YEL005C SSS1P35179 80 aa-0.52□□□□□ -2.49
VAB2YEL005C NUM1Q00402 2748 aa-0.52□□□□□ -2.49
VAB2YEL005C RPO21P04050 1733 aaKnown RBP-0.52□□□□□ -2.49
VAB2YEL005C YDR119W-AQ2V2P9 66 aa-0.53□□□□□ -2.49
VAB2YEL005C HUB1Q6Q546 73 aa-0.53□□□□□ -2.49
VAB2YEL005C CSF1Q12150 2958 aa-0.54□□□□□ -2.5
VAB2YEL005C HAP1P0CE41 1502 aa-0.59□□□□□ -2.5
VAB2YEL005C SPI1P40092 148 aa-0.61□□□□□ -2.51
VAB2YEL005C COA2Q3E823 68 aa-0.62□□□□□ -2.51
VAB2YEL005C YHR213W-AQ8TGT4 77 aa-0.62□□□□□ -2.51
VAB2YEL005C ERI1P62651 68 aaKnown RBP-0.63□□□□□ -2.51
VAB2YEL005C UFD4P33202 1483 aa-0.63□□□□□ -2.51
VAB2YEL005C MEC1P38111 2368 aa-0.63□□□□□ -2.51
VAB2YEL005C ARO1P08566 1588 aaKnown RBP-0.65□□□□□ -2.51
VAB2YEL005C DYN1P36022 4092 aa-0.65□□□□□ -2.51
VAB2YEL005C IML1P47170 1584 aa-0.66□□□□□ -2.52
VAB2YEL005C RPS27BP38711 82 aa-0.68□□□□□ -2.52
VAB2YEL005C YDR524C-BQ3E6R4 66 aa-0.68□□□□□ -2.52
VAB2YEL005C DOP1Q03921 1698 aa-0.69□□□□□ -2.52
VAB2YEL005C FKS3Q04952 1785 aa-0.69□□□□□ -2.52
VAB2YEL005C YBR230W-AQ3E762 66 aa-0.69□□□□□ -2.52
VAB2YEL005C YFL041W-AQ3E817 63 aa-0.7□□□□□ -2.52
VAB2YEL005C DNF2Q12675 1612 aa-0.71□□□□□ -2.52
VAB2YEL005C IRA1P18963 3092 aa-0.73□□□□□ -2.53
VAB2YEL005C NUP159P40477 1460 aa-0.73□□□□□ -2.53
VAB2YEL005C RPS30AP0CX33 63 aaKnown RBP-0.73□□□□□ -2.53
VAB2YEL005C RPS30BP0CX34 63 aaKnown RBP-0.73□□□□□ -2.53
VAB2YEL005C YLL006W-AQ3E814 58 aa-0.73□□□□□ -2.53
VAB2YEL005C YGR146C-AQ8TGT9 53 aa-0.73□□□□□ -2.53
VAB2YEL005C IQG1Q12280 1495 aa-0.73□□□□□ -2.53
VAB2YEL005C PAI3P01094 68 aa-0.76□□□□□ -2.53
VAB2YEL005C YGL258W-AQ3E740 77 aa-0.76□□□□□ -2.53
VAB2YEL005C YSY6P38374 65 aa-0.77□□□□□ -2.53
VAB2YEL005C YHR050W-AQ05451 56 aa-0.78□□□□□ -2.53
VAB2YEL005C YOL131WQ08270 108 aa-0.79□□□□□ -2.54
VAB2YEL005C RPO31P04051 1460 aa-0.8□□□□□ -2.54
VAB2YEL005C VPS15P22219 1454 aa-0.8□□□□□ -2.54
VAB2YEL005C BCK1Q01389 1478 aa-0.8□□□□□ -2.54
VAB2YEL005C YLR157W-DP0CE99 70 aa-0.81□□□□□ -2.54
VAB2YEL005C RRP5Q05022 1729 aaKnown RBP-0.82□□□□□ -2.54
VAB2YEL005C SCC2Q04002 1493 aa-0.83□□□□□ -2.54
VAB2YEL005C PDR12Q02785 1511 aa-0.84□□□□□ -2.54
VAB2YEL005C IRA2P19158 3079 aa-0.85□□□□□ -2.54
VAB2YEL005C YOR072W-BQ3E832 53 aa-0.86□□□□□ -2.55
VAB2YEL005C VMR1P38735 1592 aa-0.87□□□□□ -2.55
VAB2YEL005C PDR15Q04182 1529 aaKnown RBP-0.89□□□□□ -2.55
VAB2YEL005C YIL102C-AQ2V2P5 75 aa-0.89□□□□□ -2.55
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms