RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A YIL102C-AQ2V2P5 75 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A HKR1P41809 1802 aa0.32□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-DR5P0C2I2 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-PR1P0C2I9 1755 aaKnown RBP0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-JR2P47100 1755 aaKnown RBP0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-ER2Q03619 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-DR1Q03855 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-MR2Q04670 1755 aaKnown RBP0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-ML1Q04711 1755 aaKnown RBP0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-LR1Q12088 1755 aaKnown RBP0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-GR2Q12269 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-GR3Q12316 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-ORQ92393 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-DR3Q99231 1755 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A YFR010W-AP0C5N0 62 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A YOR011W-AQ3E807 68 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A YCR108CQ3E819 63 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A YOR394C-AQ8TGJ0 55 aa0.31□□□□□ -2.36
YDR261W-AYDR261W-A XRN1P22147 1528 aaKnown RBP0.31□□□□□ -2.36
YDR261W-AYDR261W-A BPH1P25356 2167 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-DR6P0C2I3 1755 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-LR2P0C2I5 1755 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-MR1Q04214 1755 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-NL1Q12112 1755 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-GR1Q12141 1755 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-PLQ12414 1755 aaKnown RBP0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-NL2Q99337 1749 aaKnown RBP0.3□□□□□ -2.36
YDR261W-AYDR261W-A YBL044WP38194 122 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-LR1P0C2J3 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-FP0CX63 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-GR2P0CX64 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A PMD1P32634 1753 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-DR2Q03494 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-OR1Q12113 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-BQ12491 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-OR2Q12501 1770 aa0.3□□□□□ -2.36
YDR261W-AYDR261W-A TY2B-DR3Q07791 1770 aaKnown RBP0.29□□□□□ -2.36
YDR261W-AYDR261W-A TCB3Q03640 1545 aaKnown RBP0.29□□□□□ -2.36
YDR261W-AYDR261W-A YLR157W-DP0CE99 70 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A YDR246W-AQ3E763 66 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A YDR182W-AQ3E796 67 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A VMA9Q3E7B6 73 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A YMR001C-AQ8TGS9 76 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A ESP1Q03018 1630 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A DOP1Q03921 1698 aa0.29□□□□□ -2.36
YDR261W-AYDR261W-A SCC2Q04002 1493 aa0.28□□□□□ -2.36
YDR261W-AYDR261W-A IQG1Q12280 1495 aa0.28□□□□□ -2.36
YDR261W-AYDR261W-A RPS27AP35997 82 aaKnown RBP0.28□□□□□ -2.36
YDR261W-AYDR261W-A YGR025WP53216 100 aa0.28□□□□□ -2.36
YDR261W-AYDR261W-A YOR008C-AQ3E7B9 74 aa0.28□□□□□ -2.36
YDR261W-AYDR261W-A TY1B-JR1P47098 1755 aa0.28□□□□□ -2.37
YDR261W-AYDR261W-A TY1B-ML2Q03434 1755 aaKnown RBP0.28□□□□□ -2.37
YDR261W-AYDR261W-A TY1B-ER1Q03612 1755 aa0.28□□□□□ -2.37
YDR261W-AYDR261W-A TY1B-OLQ12273 1755 aa0.28□□□□□ -2.37
YDR261W-AYDR261W-A MMS1Q06211 1407 aa0.28□□□□□ -2.37
YDR261W-AYDR261W-A DNF2Q12675 1612 aa0.27□□□□□ -2.37
YDR261W-AYDR261W-A APC1P53886 1748 aa0.27□□□□□ -2.37
YDR261W-AYDR261W-A IML1P47170 1584 aa0.26□□□□□ -2.37
YDR261W-AYDR261W-A YOR192C-CQ3E736 78 aa0.26□□□□□ -2.37
YDR261W-AYDR261W-A MYO4P32492 1471 aa0.26□□□□□ -2.37
YDR261W-AYDR261W-A KOG1P38873 1557 aa0.26□□□□□ -2.37
YDR261W-AYDR261W-A YBR230W-AQ3E762 66 aa0.25□□□□□ -2.37
YDR261W-AYDR261W-A YOL166W-AQ8TGJ1 51 aa0.25□□□□□ -2.37
YDR261W-AYDR261W-A VPS15P22219 1454 aa0.25□□□□□ -2.37
YDR261W-AYDR261W-A SEN1Q00416 2231 aaKnown RBP0.24□□□□□ -2.37
YDR261W-AYDR261W-A DNF1P32660 1571 aa0.24□□□□□ -2.37
YDR261W-AYDR261W-A TY3B-GQ99315 1547 aa0.24□□□□□ -2.37
YDR261W-AYDR261W-A RPO31P04051 1460 aa0.24□□□□□ -2.37
YDR261W-AYDR261W-A TOS6P48560 102 aa0.24□□□□□ -2.37
YDR261W-AYDR261W-A YLL006W-AQ3E814 58 aa0.24□□□□□ -2.37
YDR261W-AYDR261W-A FKS3Q04952 1785 aa0.24□□□□□ -2.37
YDR261W-AYDR261W-A RRP5Q05022 1729 aaKnown RBP0.23□□□□□ -2.37
YDR261W-AYDR261W-A IRC20Q06554 1556 aa0.23□□□□□ -2.37
YDR261W-AYDR261W-A YGL258W-AQ3E740 77 aa0.23□□□□□ -2.37
YDR261W-AYDR261W-A YGR146C-AQ8TGT9 53 aa0.23□□□□□ -2.37
YDR261W-AYDR261W-A PDR15Q04182 1529 aaKnown RBP0.23□□□□□ -2.37
YDR261W-AYDR261W-A ARO1P08566 1588 aaKnown RBP0.22□□□□□ -2.37
YDR261W-AYDR261W-A RPS27BP38711 82 aa0.21□□□□□ -2.38
YDR261W-AYDR261W-A COA2Q3E823 68 aa0.21□□□□□ -2.38
YDR261W-AYDR261W-A HAP1P0CE41 1502 aa0.21□□□□□ -2.38
YDR261W-AYDR261W-A YKL023C-AQ2V2P3 75 aa0.19□□□□□ -2.38
YDR261W-AYDR261W-A RPO21P04050 1733 aaKnown RBP0.19□□□□□ -2.38
YDR261W-AYDR261W-A VTH1P40438 1549 aa0.19□□□□□ -2.38
YDR261W-AYDR261W-A VTH2P40890 1549 aa0.19□□□□□ -2.38
YDR261W-AYDR261W-A SPO14P36126 1683 aa0.18□□□□□ -2.38
YDR261W-AYDR261W-A YPR010C-AA5Z2X5 72 aa0.18□□□□□ -2.38
YDR261W-AYDR261W-A RPS29AP41057 56 aaKnown RBP0.18□□□□□ -2.38
YDR261W-AYDR261W-A YOR072W-BQ3E832 53 aa0.18□□□□□ -2.38
YDR261W-AYDR261W-A TAO3P40468 2376 aa0.18□□□□□ -2.38
YDR261W-AYDR261W-A PDR5P33302 1511 aaKnown RBP0.17□□□□□ -2.38
YDR261W-AYDR261W-A BCK1Q01389 1478 aa0.17□□□□□ -2.38
YDR261W-AYDR261W-A VMR1P38735 1592 aa0.16□□□□□ -2.38
YDR261W-AYDR261W-A YDR524C-BQ3E6R4 66 aa0.16□□□□□ -2.38
YDR261W-AYDR261W-A PDR12Q02785 1511 aa0.16□□□□□ -2.38
YDR261W-AYDR261W-A YCF1P39109 1515 aaKnown RBP0.15□□□□□ -2.38
YDR261W-AYDR261W-A SPT6P23615 1451 aaKnown RBP0.15□□□□□ -2.39
YDR261W-AYDR261W-A SNQ2P32568 1501 aaKnown RBP0.14□□□□□ -2.39
YDR261W-AYDR261W-A CDC25P04821 1589 aa0.14□□□□□ -2.39
YDR261W-AYDR261W-A YOR093CQ12275 1648 aa0.14□□□□□ -2.39
YDR261W-AYDR261W-A YBT1P32386 1661 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 104.1 ms