RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C YOR072WQ08486 104 aa1.59□□□□□ -2.15
SOK1YDR006C RRP5Q05022 1729 aaKnown RBP1.59□□□□□ -2.16
SOK1YDR006C MMS1Q06211 1407 aa1.59□□□□□ -2.16
SOK1YDR006C RPC10P40422 70 aa1.59□□□□□ -2.16
SOK1YDR006C YCL048W-AQ2V2Q2 79 aa1.59□□□□□ -2.16
SOK1YDR006C VPS15P22219 1454 aa1.58□□□□□ -2.16
SOK1YDR006C FKS3Q04952 1785 aa1.57□□□□□ -2.16
SOK1YDR006C CDC25P04821 1589 aa1.57□□□□□ -2.16
SOK1YDR006C PAU7P39545 55 aa1.57□□□□□ -2.16
SOK1YDR006C YJR128WP47162 119 aa1.57□□□□□ -2.16
SOK1YDR006C YNL122CP53921 115 aaPredicted RBP1.57□□□□□ -2.16
SOK1YDR006C HHY1P39982 102 aa1.56□□□□□ -2.16
SOK1YDR006C COX12Q01519 83 aa1.56□□□□□ -2.16
SOK1YDR006C MON2P48563 1636 aaPredicted RBP1.55□□□□□ -2.16
SOK1YDR006C DNF2Q12675 1612 aa1.55□□□□□ -2.16
SOK1YDR006C SPT6P23615 1451 aaKnown RBP1.55□□□□□ -2.16
SOK1YDR006C YJR107C-AP0CT86 78 aa1.55□□□□□ -2.16
SOK1YDR006C YKL065W-AQ2V2P2 73 aa1.54□□□□□ -2.16
SOK1YDR006C RPO21P04050 1733 aaKnown RBP1.54□□□□□ -2.16
SOK1YDR006C RPL43AP0CX25 92 aaKnown RBP1.54□□□□□ -2.16
SOK1YDR006C RPL43BP0CX26 92 aa1.54□□□□□ -2.16
SOK1YDR006C YCR001WP25347 104 aa1.54□□□□□ -2.16
SOK1YDR006C ATP18P81450 59 aa1.54□□□□□ -2.16
SOK1YDR006C YIL086CP40503 102 aa1.53□□□□□ -2.16
SOK1YDR006C SNQ2P32568 1501 aaKnown RBP1.53□□□□□ -2.16
SOK1YDR006C SSK2P53599 1579 aa1.52□□□□□ -2.17
SOK1YDR006C VTH1P40438 1549 aa1.51□□□□□ -2.17
SOK1YDR006C VTH2P40890 1549 aa1.51□□□□□ -2.17
SOK1YDR006C YLR146W-AQ2V2P1 62 aa1.51□□□□□ -2.17
SOK1YDR006C APC1P53886 1748 aa1.51□□□□□ -2.17
SOK1YDR006C RPL38P49167 78 aaKnown RBP1.51□□□□□ -2.17
SOK1YDR006C SDH6Q3E785 79 aa1.51□□□□□ -2.17
SOK1YDR006C PDR12Q02785 1511 aa1.51□□□□□ -2.17
SOK1YDR006C YPR096CO13587 100 aa1.5□□□□□ -2.17
SOK1YDR006C SPI1P40092 148 aa1.5□□□□□ -2.17
SOK1YDR006C YOR093CQ12275 1648 aa1.49□□□□□ -2.17
SOK1YDR006C PDR5P33302 1511 aaKnown RBP1.49□□□□□ -2.17
SOK1YDR006C UTP20P35194 2493 aaKnown RBP1.49□□□□□ -2.17
SOK1YDR006C YBR032WP38223 100 aa1.48□□□□□ -2.17
SOK1YDR006C YOL166W-AQ8TGJ1 51 aa1.48□□□□□ -2.17
SOK1YDR006C YPR108W-AQ3E7B3 70 aa1.48□□□□□ -2.17
SOK1YDR006C PEP1P32319 1579 aa1.48□□□□□ -2.17
SOK1YDR006C ESP1Q03018 1630 aa1.48□□□□□ -2.17
SOK1YDR006C HUA1P40325 198 aa1.47□□□□□ -2.17
SOK1YDR006C TY3B-GQ99315 1547 aa1.47□□□□□ -2.17
SOK1YDR006C SMX2P40204 77 aaKnown RBP1.47□□□□□ -2.17
SOK1YDR006C BPT1P14772 1559 aa1.47□□□□□ -2.17
SOK1YDR006C YIL102CP40488 101 aa1.46□□□□□ -2.18
SOK1YDR006C ATP17Q06405 101 aa1.46□□□□□ -2.18
SOK1YDR006C NUP170P38181 1502 aa1.45□□□□□ -2.18
SOK1YDR006C YCF1P39109 1515 aaKnown RBP1.44□□□□□ -2.18
SOK1YDR006C DNF3Q12674 1656 aa1.44□□□□□ -2.18
SOK1YDR006C YLR157W-DP0CE99 70 aa1.44□□□□□ -2.18
SOK1YDR006C RIM15P43565 1770 aa1.43□□□□□ -2.18
SOK1YDR006C ULS1Q08562 1619 aa1.43□□□□□ -2.18
SOK1YDR006C YBL039W-BP0C268 59 aa1.43□□□□□ -2.18
SOK1YDR006C MEC1P38111 2368 aa1.42□□□□□ -2.18
SOK1YDR006C SPO14P36126 1683 aa1.42□□□□□ -2.18
SOK1YDR006C TOR1P35169 2470 aa1.41□□□□□ -2.18
SOK1YDR006C YAR064WP39563 99 aa1.41□□□□□ -2.18
SOK1YDR006C YJL009WP47078 108 aa1.41□□□□□ -2.18
SOK1YDR006C YGR025WP53216 100 aa1.41□□□□□ -2.18
SOK1YDR006C YMR001C-AQ8TGS9 76 aa1.41□□□□□ -2.18
SOK1YDR006C STU1P38198 1513 aa1.4□□□□□ -2.18
SOK1YDR006C COX7P10174 60 aa1.4□□□□□ -2.18
SOK1YDR006C YOL164W-AQ3E7A5 60 aa1.4□□□□□ -2.19
SOK1YDR006C YMR141CP40211 102 aa1.39□□□□□ -2.19
SOK1YDR006C YKL023C-AQ2V2P3 75 aa1.39□□□□□ -2.19
SOK1YDR006C YBR200W-AQ3E755 54 aa1.39□□□□□ -2.19
SOK1YDR006C BCK1Q01389 1478 aa1.39□□□□□ -2.19
SOK1YDR006C SNF2P22082 1703 aa1.39□□□□□ -2.19
SOK1YDR006C IRC20Q06554 1556 aa1.38□□□□□ -2.19
SOK1YDR006C TOM1Q03280 3268 aa1.38□□□□□ -2.19
SOK1YDR006C YBT1P32386 1661 aa1.38□□□□□ -2.19
SOK1YDR006C NTE1Q04958 1679 aa1.38□□□□□ -2.19
SOK1YDR006C USO1P25386 1790 aa1.37□□□□□ -2.19
SOK1YDR006C ARO1P08566 1588 aaKnown RBP1.37□□□□□ -2.19
SOK1YDR006C HUB1Q6Q546 73 aa1.37□□□□□ -2.19
SOK1YDR006C RPS27AP35997 82 aaKnown RBP1.36□□□□□ -2.19
SOK1YDR006C PDR15Q04182 1529 aaKnown RBP1.36□□□□□ -2.19
SOK1YDR006C IML1P47170 1584 aa1.36□□□□□ -2.19
SOK1YDR006C YDR182W-AQ3E796 67 aa1.36□□□□□ -2.19
SOK1YDR006C TRA1P38811 3744 aa1.33□□□□□ -2.2
SOK1YDR006C YLR307C-AQ3E825 87 aa1.32□□□□□ -2.2
SOK1YDR006C CSF1Q12150 2958 aa1.32□□□□□ -2.2
SOK1YDR006C YLR157W-EP0CF00 54 aa1.31□□□□□ -2.2
SOK1YDR006C YHR213W-BQ8TGK1 99 aa1.31□□□□□ -2.2
SOK1YDR006C YCR108CQ3E819 63 aa1.31□□□□□ -2.2
SOK1YDR006C YOR394C-AQ8TGJ0 55 aa1.31□□□□□ -2.2
SOK1YDR006C YFR009W-AP0C5M9 85 aa1.3□□□□□ -2.2
SOK1YDR006C YBL044WP38194 122 aa1.3□□□□□ -2.2
SOK1YDR006C YOL097W-AQ3E7Y9 61 aa1.3□□□□□ -2.2
SOK1YDR006C KOG1P38873 1557 aa1.3□□□□□ -2.2
SOK1YDR006C YBR072C-AQ3E794 53 aa1.3□□□□□ -2.2
SOK1YDR006C VPS13Q07878 3144 aa1.29□□□□□ -2.2
SOK1YDR006C NUP188P52593 1655 aaKnown RBP1.29□□□□□ -2.2
SOK1YDR006C YPR010C-AA5Z2X5 72 aa1.29□□□□□ -2.2
SOK1YDR006C HKR1P41809 1802 aa1.29□□□□□ -2.2
SOK1YDR006C IRA2P19158 3079 aa1.28□□□□□ -2.2
SOK1YDR006C RPS27BP38711 82 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms