RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ALS2CLQ60I27 953 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 DUPD1Q68J44 220 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF280DQ6N043 979 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 BBS12Q6ZW61 710 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF365Q70YC5 407 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 BZW1Q7L1Q6 419 aaKnown RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 SPATA2LQ8IUW3 424 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 SCUBE3Q8IX30 993 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 KRT222Q8N1A0 295 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 ARHGAP18Q8N392 663 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 TMEM130Q8N3G9 435 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 FAM172AQ8WUF8 416 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
PHGDH-215ENST00000641371 MYLPFQ96A32 169 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 HAUS1Q96CS2 278 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 FUT8Q9BYC5 575 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 B3GNT5Q9BYG0 378 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 EPC1Q9H2F5 836 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 C11orf49Q9H6J7 331 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CRTAC1Q9NQ79 661 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 COMMD8Q9NX08 183 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 WHRNQ9P202 907 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 ADAM28Q9UKQ2 775 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 TBX21Q9UL17 535 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 FAN1Q9Y2M0 1017 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 PATJQ8NI35 1801 aa10.17□□□□□ -0.78
PHGDH-215ENST00000641371 CFAP69A5D8W1 941 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 APOC4-APOC2K7ER74 178 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 CAPN9O14815 690 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TRIM66O15016 1216 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TTI1O43156 1089 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ENDOD1O94919 500 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 GJB6O95452 261 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 APOC2P02655 101 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ITGAVP06756 1048 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 LCP1P13796 627 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ITIH2P19823 946 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TGM2P21980 687 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ACAT1P24752 427 aaKnown RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 GJC1P36383 396 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FLT3P36888 993 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 PTGIRP43119 386 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 BRCC3P46736 316 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 AFF1P51825 1210 aaKnown RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TKTL1P51854 596 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 MAP3K7CLP57077 242 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 DAOAP59103 153 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TLE2Q04725 743 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ADIGQ0VDE8 80 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 PTK6Q13882 451 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 KRT81Q14533 505 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 CFAP58Q5T655 872 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ERMARDQ5T6L9 678 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 MFSD7Q6UXD7 560 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 CD300LGQ6UXG3 332 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 C4orf22Q6V702 233 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 PAQR9Q6ZVX9 377 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ANKS3Q6ZW76 656 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 SND1Q7KZF4 910 aaKnown RBP eCLIP10.16□□□□□ -0.781e-7■■■□□ 16.7
PHGDH-215ENST00000641371 NECAB2Q7Z6G3 386 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 CROCCP2Q86T23 111 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 EMC1Q8N766 993 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FAM71BQ8TC56 605 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 CASKIN2Q8WXE0 1202 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 IFT81Q8WYA0 676 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 RNF25Q96BH1 459 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FAM149B1Q96BN6 582 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 PGAP3Q96FM1 320 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 SLC2A13Q96QE2 648 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 RUFY1Q96T51 708 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FMO2Q99518 471 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 PKMYT1Q99640 499 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FERMT1Q9BQL6 677 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 C11orf84Q9BUA3 381 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ZCWPW1Q9H0M4 648 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 NGRNQ9NPE2 291 aaKnown RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TMEM39AQ9NV64 488 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF446Q9NWS9 450 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 TJP2Q9UDY2 1190 aa10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FNDC1Q4ZHG4 1894 aaPredicted RBP10.16□□□□□ -0.78
PHGDH-215ENST00000641371 FAM170AA1A519 330 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 MYBPHLA2RUH7 354 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 MCF2LO15068 1137 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 ATP2C2O75185 946 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 BAIAP3O94812 1187 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 DDHD2O94830 711 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 SLC34A2O95436 690 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 ZBED1O96006 694 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 AMHP03971 560 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 CYP2C18P33260 490 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 HTR7P34969 479 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 NR2C2P49116 596 aa10.15□□□□□ -0.78
PHGDH-215ENST00000641371 CARSP49589 748 aaKnown RBP10.15□□□□□ -0.78
PHGDH-215ENST00000641371 CTCFP49711 727 aaPredicted RBP10.15□□□□□ -0.78
PHGDH-215ENST00000641371 VCPP55072 806 aaKnown RBP10.15□□□□□ -0.78
PHGDH-215ENST00000641371 CDH6P55285 790 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms