RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 NT5C1AQ9BXI3 368 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CYP3A43Q9HB55 503 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CSNK1G1Q9HCP0 422 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 ZSCAN32Q9NX65 697 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 IL37Q9NZH6 218 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 EHD2Q9NZN4 543 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 CFAP97Q9P2B7 532 aa18.77■□□□□ 0.6
PNKP-230ENST00000638016 WDR87Q6ZQQ6 2873 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 PPP1R3GB7ZBB8 358 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 K7ESF4 209 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 TRDMT1O14717 391 aaKnown RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 SLC16A3O15427 465 aaKnown RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 LILRB5O75023 590 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 RTN3O95197 1032 aaPredicted RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 FAM200BP0CF97 657 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 TCF3P15923 654 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 CCR3P51677 355 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 FKBP3Q00688 224 aaKnown RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 SRSF5Q13243 272 aaKnown RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 GAB4Q2WGN9 574 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 DGKKQ5KSL6 1271 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 PPP1R26Q5T8A7 1209 aaPredicted RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 HEATR6Q6AI08 1181 aaKnown RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 FILIP1Q7Z7B0 1213 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 SPEM1Q8N4L4 309 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 SLC35C1Q96A29 364 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 HNRNPABQ99729 332 aaKnown RBP18.76■□□□□ 0.59
PNKP-230ENST00000638016 CTNND2Q9UQB3 1225 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 PCDHGA2Q9Y5H1 932 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 KIAA1549LQ6ZVL6 1849 aa18.76■□□□□ 0.59
PNKP-230ENST00000638016 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 CHURC1-FNTBB4DL54 471 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 PSMA7O14818 248 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 CYP26A1O43174 497 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 ZDHHC11BP0C7U3 371 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 PPP3CCP48454 512 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 FNTBP49356 437 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 STX17P56962 302 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 LRRC63Q05C16 580 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 LRMPQ12912 555 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 LPAL2Q16609 132 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 TTI2Q6NXR4 508 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 ATRIPQ8WXE1 791 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 CISHQ9NSE2 258 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 OSER1Q9NX31 292 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 HOOK1Q9UJC3 728 aaKnown RBP18.75■□□□□ 0.59
PNKP-230ENST00000638016 CIZ1Q9ULV3 898 aaPredicted RBP18.75■□□□□ 0.59
PNKP-230ENST00000638016 SPTBN4Q9H254 2564 aa18.75■□□□□ 0.59
PNKP-230ENST00000638016 SDK1Q7Z5N4 2213 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 RNF40O75150 1001 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 TBX18O95935 607 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 CYP17A1P05093 508 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 PFKLP17858 780 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 PDE6CP51160 858 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 RAD23BP54727 409 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 MESP2Q0VG99 397 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 GRSF1Q12849 480 aaKnown RBP eCLIP18.74■□□□□ 0.59
PNKP-230ENST00000638016 MORC3Q14149 939 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 MAMSTRQ6ZN01 415 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 SFTPA1Q8IWL2 248 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 ELOA2Q8IYF1 753 aaPredicted RBP18.74■□□□□ 0.59
PNKP-230ENST00000638016 SLC4A11Q8NBS3 891 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 CCDC150Q8NCX0 1101 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 PDZD8Q8NEN9 1154 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 NELFBQ8WX92 580 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 P2RY13Q9BPV8 354 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 IER2Q9BTL4 223 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 ARMCX3Q9UH62 379 aaPredicted RBP18.74■□□□□ 0.59
PNKP-230ENST00000638016 NUDT5Q9UKK9 219 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 FRYLO94915 3013 aa18.74■□□□□ 0.59
PNKP-230ENST00000638016 MDM4O15151 490 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 IRF1P10914 325 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 ACO1P21399 889 aaKnown RBP18.73■□□□□ 0.59
PNKP-230ENST00000638016 OPRD1P41143 372 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 PXNP49023 591 aaPredicted RBP18.73■□□□□ 0.59
PNKP-230ENST00000638016 HECTD3Q5T447 861 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 C12orf40Q86WS4 652 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 OVCA2Q8WZ82 227 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 CD101Q93033 1021 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 DHTKD1Q96HY7 919 aaPredicted RBP18.73■□□□□ 0.59
PNKP-230ENST00000638016 HEXIM2Q96MH2 286 aaKnown RBP18.73■□□□□ 0.59
PNKP-230ENST00000638016 HINFPQ9BQA5 517 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 SEMA4AQ9H3S1 761 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 NMUR1Q9HB89 426 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 SMG5Q9UPR3 1016 aaKnown RBP18.73■□□□□ 0.59
PNKP-230ENST00000638016 COQ4Q9Y3A0 265 aa18.73■□□□□ 0.59
PNKP-230ENST00000638016 ZNF292O60281 2723 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 STX10O60499 249 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 TLR5O60602 858 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 STIM1Q13586 685 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 DHCR24Q15392 516 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 CAMK4Q16566 473 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 SNX30Q5VWJ9 437 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 EPC1Q9H2F5 836 aa18.72■□□□□ 0.59
PNKP-230ENST00000638016 DCHS1Q96JQ0 3298 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 A0A1W2PQH9 124 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 TULP2O00295 520 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 NFATC1O95644 943 aa18.71■□□□□ 0.59
PNKP-230ENST00000638016 SLC6A11P48066 632 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms