RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 ACADLP28330 430 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 FBXW10Q5XX13 1052 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 KDELC2Q7Z4H8 507 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 TRAPPC9Q96Q05 1148 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 UGT2B28Q9BY64 529 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 TSC22D2O75157 780 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 CACTIN-AS1Q8N1I8 211 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 OR6J1Q8NGC5 347 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 CHAMP1Q96JM3 812 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 REXO4Q9GZR2 422 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 SH3GLB1Q9Y371 365 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 METP08581 1390 aa18.61■□□□□ 0.57
CACNA1A-247ENST00000637769 A0A088AWK7 358 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 UBTFL6P0CB48 400 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 ZNF10P21506 573 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 ALG11Q2TAA5 492 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 RAET1EQ8TD07 263 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 CCDC153Q494R4 210 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 TYW3Q6IPR3 259 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 COMMD9Q9P000 198 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 PIM2Q9P1W9 311 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 EFCAB10A6NFE3 127 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 H7C4K7 107 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 NCK2O43639 380 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 F9P00740 461 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 PDIA6Q15084 440 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 UCHL3P15374 230 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 CCNA2P20248 432 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 TRAF2Q12933 501 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 SKIV2LQ15477 1246 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 HAVCR1Q96D42 359 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 NOD2Q9HC29 1040 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 CHD4Q14839 1912 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 EXTL3O43909 919 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 HPCAL1P37235 193 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 C11orf96Q7Z7L8 435 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 HNRNPLLQ8WVV9 542 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 AP3S1Q92572 193 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 KCTD14Q9BQ13 255 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 TRPM1Q7Z4N2 1603 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 EGFRP00533 1210 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 NCAM1P13591 858 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 SH3RF3Q8TEJ3 882 aaPredicted RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 SCUBE2Q9NQ36 999 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 MFN2O95140 757 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 CYP2D6P10635 497 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 HOXB6P17509 224 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 C4orf33Q8N1A6 199 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 SIK3Q9Y2K2 1263 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
CACNA1A-247ENST00000637769 RPS6KL1Q9Y6S9 549 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 ATP6V1B2P21281 511 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 PWP1Q13610 501 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 PCNX4Q63HM2 1172 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 SGMS1Q86VZ5 419 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 ZCCHC2Q9C0B9 1178 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 LOC102724159A0A0B4J2E5 919 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 PWP2Q15269 919 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 STX12Q86Y82 276 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 ASB2Q96Q27 587 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 RRN3P2A6NIE6 340 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 IFRD1O00458 451 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 MCAMP43121 646 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 CPT1AP50416 773 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 DGKKQ5KSL6 1271 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 FKBP14Q9NWM8 211 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 KIAA1257Q9ULG3 409 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 COQ6Q9Y2Z9 468 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 PRKAB2O43741 272 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 CYP24A1Q07973 514 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 RP1L1Q8IWN7 2480 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 TPBGLP0DKB5 382 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 CCDC33Q8N5R6 958 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 NEO1Q92859 1461 aa18.59■□□□□ 0.57
CACNA1A-247ENST00000637769 SRGNP10124 158 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 PREX2Q70Z35 1606 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 ZNF335Q9H4Z2 1342 aaPredicted RBP18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 MYL12BO14950 172 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 CORO7P57737 925 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 GMFBP60983 142 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 JAMLQ86YT9 394 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 TRIM9Q9C026 710 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 DPP7Q9UHL4 492 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 DBR1Q9UK59 544 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 PHF20L1A8MW92 1017 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 MGRN1O60291 552 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 GEMP55040 296 aa18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 ZNF669Q96BR6 464 aaPredicted RBP18.58■□□□□ 0.57
CACNA1A-247ENST00000637769 TEX13BQ9BXU2 312 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms