RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CEP68Q76N32 757 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 GLMNQ92990 594 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ENTPD4Q9Y227 616 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MTO1Q9Y2Z2 717 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 STK36Q9NRP7 1315 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SLC16A3O15427 465 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CYP26A1O43174 497 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 B3GAT3O94766 335 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CPSF4O95639 269 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CYP2C8P10632 490 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CYP2A6P11509 494 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 VAV1P15498 845 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MYL12AP19105 171 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SERPINH1P50454 418 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CCR4P51679 360 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RPS6P62753 249 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 POLR2LP62875 67 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 R3HCC1LQ7Z5L2 792 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 OR8H2Q8N162 312 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 STAG2Q8N3U4 1231 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MDM1Q8TC05 714 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SLC9A7Q96T83 725 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 UXTQ9UBK9 157 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MINPP1Q9UNW1 487 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 COL15A1P39059 1388 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TCP11X1B4DZS4 312 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 KCNQ3O43525 872 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 DTNBO60941 627 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PMPCBO75439 489 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RHOCP08134 193 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PTPN1P18031 435 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 HOXC12P31275 282 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CHRNB3Q05901 458 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 EN1Q05925 392 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 GRIK3Q13003 919 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 GRM4Q14833 912 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PDZK1Q5T2W1 519 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 C12orf60Q5U649 245 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TRIQKQ629K1 86 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CACTIN-AS1Q8N1I8 211 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 GALNT4Q8N4A0 578 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CPA5Q8WXQ8 436 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PPP1R16AQ96I34 528 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SHROOM2Q13796 1616 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ARHGEF12Q9NZN5 1544 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 IGSF9BQ9UPX0 1349 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TCN1P20061 433 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 POU1F1P28069 291 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TGFBR2P37173 567 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TMED10P49755 219 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PSMD7P51665 324 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MARSP56192 900 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PTK7Q13308 1070 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 DDR2Q16832 855 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SUSD4Q5VX71 490 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 C3orf62Q6ZUJ4 267 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 KRT73Q86Y46 540 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 FAM20CQ8IXL6 584 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PRMT1Q99873 361 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 KCTD10Q9H3F6 313 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 DPP3Q9NY33 737 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM94Q12767 1356 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 hCG_2014768A0A024R1R8 64 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PLA2G6O60733 806 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 SNRPAP09012 282 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 LBPP18428 481 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TGM2P21980 687 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 MLH1P40692 756 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PRCPP42785 496 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 NUDT2P50583 147 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RAB2AP61019 212 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CASP12Q6UXS9 341 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CHPFQ8IZ52 775 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 IL17REQ8NFR9 667 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 INTS7Q9NVH2 962 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 DRG1Q9Y295 367 aaKnown RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 NEU2Q9Y3R4 380 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PITPNM2Q9BZ72 1349 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TRIM49P0CI25 452 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TRIM49CP0CI26 452 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 EPHB2P29323 1055 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 HPCAL1P37235 193 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 RHAGQ02094 409 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 KLC1Q07866 573 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 EMC2Q15006 297 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 CTXN3Q4LDR2 81 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TTC33Q6PID6 262 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 FAM220AQ7Z4H9 259 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 APLFQ8IW19 511 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF557Q8N988 423 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ABCG4Q9H172 646 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 POLR1BQ9H9Y6 1135 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 KLF15Q9UIH9 416 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 HPS5Q9UPZ3 1129 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 ARIH1Q9Y4X5 557 aaPredicted RBP5.73□□□□□ -1.49
SCN1A-209ENST00000635750 PRAMEF22A3QJZ6 481 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TEX33O43247 280 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 TSC22D2O75157 780 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 GRAP2O75791 330 aa5.73□□□□□ -1.49
SCN1A-209ENST00000635750 AP1G2O75843 785 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms