RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 NOVA2Q9UNW9 492 aaKnown RBP5.82□□□□□ -1.48
NEK3-211ENST00000629912 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 CFAP69A5D8W1 941 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ARL5CA6NH57 179 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 MOXD2PA6NHM9 499 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 KIF3CO14782 793 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 RASGRF2O14827 1237 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 EIF3HO15372 352 aaKnown RBP eCLIP5.81□□□□□ -1.48
NEK3-211ENST00000629912 SHBGP04278 402 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CYP11A1P05108 521 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ABHD2P08910 425 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CD48P09326 243 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 PRKAR2AP13861 404 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 CCDC130P13994 396 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 TSHRP16473 764 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ZFXP17010 805 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 TGM2P21980 687 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CCND3P30281 292 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 L1CAMP32004 1257 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 NOS2P35228 1153 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 RDXP35241 583 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 RPL22P35268 128 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 THPOP40225 353 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 MATKP42679 507 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 MAGEA4P43358 317 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CDH6P55285 790 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 HDAC4P56524 1084 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 EIF3EP60228 445 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 GNGT1P63211 74 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 FAM189BP81408 668 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 GPS1Q13098 491 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 XRCC4Q13426 336 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ITGA7Q13683 1181 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 AUHQ13825 339 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 LPIN1Q14693 890 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 STAT4Q14765 748 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 NOMO1Q15155 1222 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 TAF5Q15542 800 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 TRIP13Q15645 432 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 ZSCAN26Q16670 478 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 KYNUQ16719 465 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 UPP1Q16831 310 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 KCTD19Q17RG1 926 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 C15orf59Q2T9L4 293 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 DEFB115Q30KQ5 88 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 P3H1Q32P28 736 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ANKRD20A8PQ5CZ79 823 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ZNF618Q5T7W0 954 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 RNASEH2BQ5TBB1 312 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 SH3PXD2AQ5TCZ1 1133 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 WSCD1Q658N2 575 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 SLC9A4Q6AI14 798 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CYP4F22Q6NT55 531 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 DCLRE1AQ6PJP8 1040 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 BNIPLQ7Z465 357 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 RNF180Q86T96 592 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 PIGZQ86VD9 579 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 RFX6Q8HWS3 928 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 FUKQ8N0W3 1084 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 SCML4Q8N228 414 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 SH2D3CQ8N5H7 860 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 PLD5Q8N7P1 536 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 SLC43A3Q8NBI5 491 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 SLC2A14Q8TDB8 520 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 PXYLP1Q8TE99 480 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 FAM172AQ8WUF8 416 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 HSPH1Q92598 858 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ACSF2Q96CM8 615 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 RTP4Q96DX8 246 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 PIWIL1Q96J94 861 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 ZFP42Q96MM3 310 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 UROC1Q96N76 676 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 TTC25Q96NG3 672 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 GAD1Q99259 594 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 LPIN3Q9BQK8 851 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CCDC77Q9BR77 488 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ZNF670Q9BS34 389 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 B3GNT5Q9BYG0 378 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 SEZ6LQ9BYH1 1024 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 EPN3Q9H201 632 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CDC42EP4Q9H3Q1 356 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 CNOT10Q9H9A5 744 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 USP29Q9HBJ7 922 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 GOLGA2P5Q9HBQ8 144 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 PCDH18Q9HCL0 1135 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 FAM49BQ9NUQ9 324 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 RNF19AQ9NV58 838 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.81□□□□□ -1.48
NEK3-211ENST00000629912 NINJ2Q9NZG7 142 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 BCCIPQ9P287 314 aaKnown RBP eCLIP5.81□□□□□ -1.48
NEK3-211ENST00000629912 DDX20Q9UHI6 824 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 SLC12A6Q9UHW9 1150 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 CDH9Q9ULB4 789 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 ZMYND8Q9ULU4 1186 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 SHOC2Q9UQ13 582 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 FARP1Q9Y4F1 1045 aaPredicted RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 PTCH2Q9Y6C5 1203 aa5.81□□□□□ -1.48
NEK3-211ENST00000629912 TDRD15B5MCY1 1934 aaKnown RBP5.81□□□□□ -1.48
NEK3-211ENST00000629912 ARHGEF37A1IGU5 675 aa5.8□□□□□ -1.48
NEK3-211ENST00000629912 BCLAF3A2AJT9 711 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms