RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 TPD52L2O43399 206 aaKnown RBP4.96□□□□□ -1.62
CDKL5-207ENST00000624700 KRT4P19013 534 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 GRIA3P42263 894 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 PGDP52209 483 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 SOX10P56693 466 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 TIRAPP58753 221 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 TIAL1Q01085 375 aaKnown RBP eCLIP4.96□□□□□ -1.62
CDKL5-207ENST00000624700 ICA1Q05084 483 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 STK3Q13188 491 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 CLCA4Q14CN2 919 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 MANEALQ5VSG8 457 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 RRAGBQ5VZM2 374 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 Q6YL49 198 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 Q6ZPA2 131 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 KIAA0408Q6ZU52 694 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 ZNF551Q7Z340 670 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-207ENST00000624700 TTC30AQ86WT1 665 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 RP9Q8TA86 221 aaKnown RBP4.96□□□□□ -1.62
CDKL5-207ENST00000624700 DNAJB14Q8TBM8 379 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 SOCS4Q8WXH5 440 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 KIAA1191Q96A73 305 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 HIST1H2AAQ96QV6 131 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 TTPALQ9BTX7 342 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 DPCDQ9BVM2 203 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-207ENST00000624700 TTLL2Q9BWV7 592 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 VN1R3Q9BXE9 311 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 SERTAD4Q9NUC0 356 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 SLC39A10Q9ULF5 831 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 HPSEQ9Y251 543 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 PCDHGB2Q9Y5G2 931 aa4.96□□□□□ -1.62
CDKL5-207ENST00000624700 EPN1Q9Y6I3 576 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-207ENST00000624700 hCG_1642624A0A1W2PR95 340 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 IFRD1O00458 451 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-207ENST00000624700 PODXLO00592 558 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 SKAP2O75563 359 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-207ENST00000624700 GLP2RO95838 553 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 TTLL1O95922 423 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 GCP02774 474 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 FAM163BP0C2L3 166 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 EGR1P18146 543 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 GABRB3P28472 473 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 ATICP31939 592 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 LIPAP38571 399 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 SLC5A9Q2M3M2 681 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 DEPDC1Q5TB30 811 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 DENND2CQ68D51 928 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 DPY19L2P1Q6NXN4 242 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 ANKRD16Q6P6B7 361 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 TLDC1Q6P9B6 456 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 TSHZ1Q6ZSZ6 1077 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 PARS2Q7L3T8 475 aaKnown RBP4.95□□□□□ -1.62
CDKL5-207ENST00000624700 KCTD20Q7Z5Y7 419 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 GRASPQ7Z6J2 395 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-207ENST00000624700 SMC5Q8IY18 1101 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 CAGE1Q8TC20 777 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 GLG1Q92896 1179 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 NUDT22Q9BRQ3 303 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 C17orf80Q9BSJ5 609 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 SLC25A32Q9H2D1 315 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 ARHGEF3Q9NR81 526 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 HELLSQ9NRZ9 838 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 STEAP1Q9UHE8 339 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 ZMYND8Q9ULU4 1186 aaPredicted RBP4.95□□□□□ -1.62
CDKL5-207ENST00000624700 DRG1Q9Y295 367 aaKnown RBP4.95□□□□□ -1.62
CDKL5-207ENST00000624700 TBC1D30Q9Y2I9 924 aa4.95□□□□□ -1.62
CDKL5-207ENST00000624700 A0A087WV62 115 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 ZAR1LA6NP61 321 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 URI1O94763 535 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 VIPP01282 170 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 CHRM2P08172 466 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 NDUFB7P17568 137 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 ADORA2AP29274 412 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 RARRES1P49788 294 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 ITGA8P53708 1063 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 PDE1AP54750 535 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 NSUN2Q08J23 767 aaKnown RBP eCLIP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 ATP1A4Q13733 1029 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 ST3GAL2Q16842 350 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 TRIM71Q2Q1W2 868 aaKnown RBP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 TREML2Q5T2D2 321 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 C10orf62Q5T681 223 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 HECTD2Q5U5R9 776 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 CRTC1Q6UUV9 634 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 CAND1Q86VP6 1230 aaKnown RBP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 VRK3Q8IV63 474 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 SLC44A3Q8N4M1 653 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 GLIS1Q8NBF1 620 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 MBD3L2Q8NHZ7 208 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 ACTRT2Q8TDY3 377 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 RFKQ969G6 155 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 MUL1Q969V5 352 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 LTV1Q96GA3 475 aaPredicted RBP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 VPS50Q96JG6 964 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.94□□□□□ -1.62
CDKL5-207ENST00000624700 PCDHAC1Q9H158 963 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 MYH16Q9H6N6 1097 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 GJB4Q9NTQ9 266 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 SNX14Q9Y5W7 946 aa4.94□□□□□ -1.62
CDKL5-207ENST00000624700 COL15A1P39059 1388 aa4.93□□□□□ -1.62
CDKL5-207ENST00000624700 FAM234BA2RU67 622 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms