RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ZNF707Q96C28 371 aaPredicted RBP20.89■□□□□ 0.94
PDLIM2-221ENST00000622702 NECTIN4Q96NY8 510 aa20.89■□□□□ 0.94
PDLIM2-221ENST00000622702 EIF3CQ99613 913 aaKnown RBP20.89■□□□□ 0.94
PDLIM2-221ENST00000622702 PRKD2Q9BZL6 878 aa20.89■□□□□ 0.94
PDLIM2-221ENST00000622702 SPTLC3Q9NUV7 552 aa20.89■□□□□ 0.94
PDLIM2-221ENST00000622702 IL37Q9NZH6 218 aa20.89■□□□□ 0.94
PDLIM2-221ENST00000622702 GABBR2O75899 941 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 LRG1P02750 347 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 POU2F2P09086 479 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 HNRNPA1P09651 372 aaKnown RBP eCLIP20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 GABRB2P47870 512 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 SLC5A3P53794 718 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 EPHB3P54753 998 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 SNX16P57768 344 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 MTF1Q14872 753 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 VEPH1Q14D04 833 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 CCDC122Q5T0U0 273 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 DENND5BQ6ZUT9 1274 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 MON1BQ7L1V2 547 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 GPRIN1Q7Z2K8 1008 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 IPO4Q8TEX9 1081 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 VCPIP1Q96JH7 1222 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 NECAB3Q96P71 396 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 PIDD1Q9HB75 910 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 LRRC4Q9HBW1 653 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 ST7Q9NRC1 585 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 COMMD8Q9NX08 183 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 ASB3Q9Y575 518 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 USP3Q9Y6I4 520 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 ZNF263O14978 683 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 CCL16O15467 120 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 FTLP02792 175 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 C1QBPQ07021 282 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 PTP4A2Q12974 167 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 GPR152Q8TDT2 470 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 GIPC2Q8TF65 315 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 TTLL2Q9BWV7 592 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 MIS12Q9H081 205 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 KCNF1Q9H3M0 494 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 POMKQ9H5K3 350 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 PRKAG3Q9UGI9 489 aa20.88■□□□□ 0.93
PDLIM2-221ENST00000622702 FAM92AA1XBS5 289 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 SLC38A8A6NNN8 435 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 TMCO5BA8MYB1 307 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 E5RJQ4 531 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 RTN3O95197 1032 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 CSH1P0DML2 217 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 CSH2P0DML3 217 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 TKTL1P51854 596 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 ADIGQ0VDE8 80 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 C10orf76Q5T2E6 689 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 MMS22LQ6ZRQ5 1243 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 ITIH5Q86UX2 942 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 MCOLN2Q8IZK6 566 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 SCML4Q8N228 414 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 PSMG2Q969U7 264 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 C18orf8Q96DM3 657 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 MYRFLQ96LU7 910 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 UHRF1Q96T88 793 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 PHF7Q9BWX1 381 aaPredicted RBP20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 SYNCQ9H7C4 482 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 CNGB3Q9NQW8 809 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 EHD2Q9NZN4 543 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 ADAM22Q9P0K1 906 aa20.87■□□□□ 0.93
PDLIM2-221ENST00000622702 IPO7O95373 1038 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 ERBB2P04626 1255 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 CALB1P05937 261 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 HMGA1P17096 107 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 SPA17Q15506 151 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 PM20D1Q6GTS8 502 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 ADHFE1Q8IWW8 467 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 SIX6OS1Q8N1H7 587 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 SCAMP5Q8TAC9 235 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 TRMT2BQ96GJ1 504 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 C11orf70Q9BRQ4 267 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 FBXO44Q9H4M3 255 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 TJP2Q9UDY2 1190 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 STRIP2Q9ULQ0 834 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 GREB1Q4ZG55 1949 aa20.86■□□□□ 0.93
PDLIM2-221ENST00000622702 PAPSS1O43252 624 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 XYLBO75191 536 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 FBXO21O94952 628 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 LCP1P13796 627 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 GSCP56915 257 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 USP46P62068 366 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 ZP2Q05996 745 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 MTMR3Q13615 1198 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 DNAJB7Q7Z6W7 309 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 ZDHHC17Q8IUH5 632 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 ELMOD1Q8N336 334 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 STKLD1Q8NE28 680 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 TRIM11Q96F44 468 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 RPGRIP1Q96KN7 1286 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 ULBP1Q9BZM6 244 aa20.85■□□□□ 0.93
PDLIM2-221ENST00000622702 NCANO14594 1321 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 FAM170AA1A519 330 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 ANKRD62A6NC57 917 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 ZBED1O96006 694 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 H2AFZP0C0S5 128 aa20.84■□□□□ 0.93
PDLIM2-221ENST00000622702 MYBL1P10243 752 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms