RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 MAMLD1Q13495 774 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 IFI16Q16666 785 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 FAM102AQ5T9C2 384 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SDHAF4Q5VUM1 108 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 PDE12Q6L8Q7 609 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 DNAJC24Q6P3W2 148 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 OLFML1Q6UWY5 402 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 NUP93Q8N1F7 819 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SIX6OS1Q8N1H7 587 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SCML4Q8N228 414 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 TPCN2Q8NHX9 752 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 JOSD2Q8TAC2 188 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 MICAL1Q8TDZ2 1067 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 NDRG1Q92597 394 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.058e-7■□□□□ 11
TARDBP-219ENST00000617757 PIWIL1Q96J94 861 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 BTBD6Q96KE9 485 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SPATA17Q96L03 361 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 CEP295NLQ96MC4 621 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SEPT5Q99719 369 aaPredicted RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 SELENOOQ9BVL4 669 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 LMAN2LQ9H0V9 348 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 CNGB3Q9NQW8 809 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 METTL5Q9NRN9 209 aaKnown RBP8.48□□□□□ -1.05
TARDBP-219ENST00000617757 IL37Q9NZH6 218 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 TMEM59LQ9UK28 342 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 CAPN6Q9Y6Q1 641 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 C2orf16Q68DN1 1984 aa8.48□□□□□ -1.05
TARDBP-219ENST00000617757 HELZP42694 1942 aaKnown RBP8.47□□□□□ -1.05
TARDBP-219ENST00000617757 A0A1W2PPC1 479 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 GRID2IPA4D2P6 1211 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 YJEFN3A6XGL0 299 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 E7ENQ6 273 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 RFXAPO00287 272 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 KIF5CO60282 957 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 CLASP2O75122 1294 aaKnown RBP8.47□□□□□ -1.05
TARDBP-219ENST00000617757 GRAP2O75791 330 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 ZBED1O96006 694 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 GLUD1P00367 558 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 USP17L7P0C7H9 530 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 SPATA31D3P0C874 917 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 ATF6P18850 670 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 ELF1P32519 619 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 RFC1P35251 1148 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-219ENST00000617757 CLCN4P51793 760 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 SLC5A3P53794 718 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 TAF5Q15542 800 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 LRIT3Q3SXY7 679 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 EFHC1Q5JVL4 640 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 PM20D1Q6GTS8 502 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 DCUN1D2Q6PH85 259 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 SPATA31D4Q6ZUB0 917 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 DENND5BQ6ZUT9 1274 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 HFE2Q6ZVN8 426 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 SLC26A9Q7LBE3 791 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 BHLHA9Q7RTU4 235 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 SLC35F6Q8N357 371 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 EMC1Q8N766 993 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 STKLD1Q8NE28 680 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 SCAMP5Q8TAC9 235 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 GPR152Q8TDT2 470 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 GIPC2Q8TF65 315 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 GDPD5Q8WTR4 605 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 MCEEQ96PE7 176 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 TRIM7Q9C029 511 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 ASNSD1Q9NWL6 643 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 COMMD8Q9NX08 183 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 ANAPC7Q9UJX3 599 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 FBXW11Q9UKB1 542 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 COLQQ9Y215 455 aaPredicted RBP8.47□□□□□ -1.05
TARDBP-219ENST00000617757 TRANK1O15050 2925 aa8.47□□□□□ -1.05
TARDBP-219ENST00000617757 NOTCH4Q99466 2003 aa8.46□□□□□ -1.05
TARDBP-219ENST00000617757 PDE4DIPQ5VU43 2346 aa8.46□□□□□ -1.05
TARDBP-219ENST00000617757 FAM92AA1XBS5 289 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 SLC38A8A6NNN8 435 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 MYO1FO00160 1098 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 PRRG1O14668 218 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 SART1O43290 800 aaKnown RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 BUB1BO60566 1050 aaPredicted RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 HSF2BPO75031 334 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 PALMO75781 387 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 PROSCO94903 275 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 RTN3O95197 1032 aaPredicted RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 LTFP02788 710 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 TUBB4AP04350 444 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 GLI1P08151 1106 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 YWHAQP27348 245 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 FLT3P36888 993 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 ALDH1A3P47895 512 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 RNASE9P60153 205 aaKnown RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 GNG11P61952 73 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 USP46P62068 366 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 ETF1P62495 437 aaKnown RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 YWHAZP63104 245 aaKnown RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 OGDHQ02218 1023 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 ZNF252P-AS1Q0IIN9 211 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 TWF1Q12792 350 aa8.46□□□□□ -1.06
TARDBP-219ENST00000617757 IFRD2Q12894 506 aaPredicted RBP8.46□□□□□ -1.06
TARDBP-219ENST00000617757 MTMR3Q13615 1198 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms