RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 PNPLA8Q9NP80 782 aa17.66■□□□□ 0.42
CBWD3-211ENST00000615061 ACP6Q9NPH0 428 aa17.66■□□□□ 0.42
CBWD3-211ENST00000615061 SMPD4Q9NXE4 827 aa17.66■□□□□ 0.42
CBWD3-211ENST00000615061 APEX2Q9UBZ4 518 aa17.66■□□□□ 0.42
CBWD3-211ENST00000615061 ATG2BQ96BY7 2078 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 OLFM2O95897 454 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 PAEPP09466 180 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 ZDHHC11BP0C7U3 371 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 KRT5P13647 590 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 EEF1GP26641 437 aaKnown RBP17.65■□□□□ 0.42
CBWD3-211ENST00000615061 SOX9P48436 509 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 PPP3CCP48454 512 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 KIF11P52732 1056 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 STARD6P59095 220 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 MYL5Q02045 173 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 KCNMA1Q12791 1236 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 ZNF268Q14587 947 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-211ENST00000615061 ZNF77Q15935 545 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 KLHL40Q2TBA0 621 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 ANO6Q4KMQ2 910 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 ASTLQ6HA08 431 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-211ENST00000615061 DPY19L2P1Q6NXN4 242 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 PDZD8Q8NEN9 1154 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 SH3RF2Q8TEC5 729 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 OVCA2Q8WZ82 227 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 FBXO44Q9H4M3 255 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 KIF9Q9HAQ2 790 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 COMMD8Q9NX08 183 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 OSER1Q9NX31 292 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 MTF2Q9Y483 593 aaPredicted RBP17.65■□□□□ 0.42
CBWD3-211ENST00000615061 WDR87Q6ZQQ6 2873 aa17.65■□□□□ 0.42
CBWD3-211ENST00000615061 SCAMP3O14828 347 aaKnown RBP17.64■□□□□ 0.41
CBWD3-211ENST00000615061 COCHO43405 550 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 AOC1P19801 751 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 RFX1P22670 979 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 NCAPHQ15003 741 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 KRT31Q15323 416 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 ARHGAP29Q52LW3 1261 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 VPS16Q9H269 839 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 HSD3B7Q9H2F3 369 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 NMUR1Q9HB89 426 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 GKN1Q9NS71 199 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 ARHGAP26Q9UNA1 814 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 CNTN6Q9UQ52 1028 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 SCML2Q9UQR0 700 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 CPQQ9Y646 472 aa17.64■□□□□ 0.41
CBWD3-211ENST00000615061 OTOL1A6NHN0 477 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 BECN2A8MW95 431 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 CLCN5P51795 746 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 BCAT1P54687 386 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 PRKCQQ04759 706 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 USP4Q13107 963 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 MTF1Q14872 753 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 PKDCCQ504Y2 493 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 SNX30Q5VWJ9 437 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 AOPEPQ8N6M6 819 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 FAM83CQ9BQN1 747 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 DDX23Q9BUQ8 820 aaKnown RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 EBF3Q9H4W6 596 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 TRPV5Q9NQA5 729 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 HESX1Q9UBX0 185 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 USP3Q9Y6I4 520 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 PIAS3Q9Y6X2 628 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 A0A1W2PQH9 124 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 TBX18O95935 607 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 DCNP07585 359 aaKnown RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 PNMA6AP0CW24 399 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 MBL2P11226 248 aaPredicted RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 MFAP3P55082 362 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 SLC7A9P82251 487 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 BST2Q10589 180 aaKnown RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 RAB41Q5JT25 222 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 HECTD3Q5T447 861 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 LCLAT1Q6UWP7 414 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 CSGALNACT1Q8TDX6 532 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 NDRG1Q92597 394 aaKnown RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 SHDQ96IW2 340 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 HPS4Q9NQG7 708 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 TLR8Q9NR97 1041 aaKnown RBP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 NUDT5Q9UKK9 219 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 KIAA1257Q9ULG3 409 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.63■□□□□ 0.41
CBWD3-211ENST00000615061 WNT6Q9Y6F9 365 aa17.63■□□□□ 0.41
CBWD3-211ENST00000615061 KANSL1LA0AUZ9 987 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 SYCE3A1L190 88 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 LEFTY2O00292 366 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 XPO1O14980 1071 aaKnown RBP17.62■□□□□ 0.41
CBWD3-211ENST00000615061 GLULP15104 373 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 ARSAP15289 507 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 UBXN2BQ14CS0 331 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 SCD5Q86SK9 330 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
CBWD3-211ENST00000615061 FUCA2Q9BTY2 467 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 THG1LQ9NWX6 298 aaKnown RBP17.62■□□□□ 0.41
CBWD3-211ENST00000615061 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 HCN4Q9Y3Q4 1203 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 USP34Q70CQ2 3546 aa17.62■□□□□ 0.41
CBWD3-211ENST00000615061 M0QYV0 167 aa17.61■□□□□ 0.41
CBWD3-211ENST00000615061 TLR5O60602 858 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms