RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 EPHB2P29323 1055 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 CDH8P55286 799 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 POLE2P56282 527 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 P3H1Q32P28 736 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 LRRC23Q53EV4 343 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 JADE1Q6IE81 842 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 ARHGAP18Q8N392 663 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 TMEM35BQ8NCS4 154 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 C9orf72Q96LT7 481 aa13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.29
PCDHGA4-202ENST00000612927 MAGEA13PA6NCF6 341 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 MMP3P08254 477 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 T-ENOLP0DO92 83 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 MCF2P10911 925 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 KLRC2P26717 231 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 FOXN2P32314 431 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 MARCH8Q5T0T0 291 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 SPRYD7Q5W111 196 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 TTC8Q8TAM2 541 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 SDCBP2Q9H190 292 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 CYTH4Q9UIA0 394 aa13.21□□□□□ -0.3
PCDHGA4-202ENST00000612927 H0Y3Z8 333 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 LIASO43766 372 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 LSM8O95777 96 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 CAV1Q03135 178 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 RNASELQ05823 741 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 GRIK4Q16099 956 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 SMTNL2Q2TAL5 461 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 PTPN20Q4JDL3 420 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 RIBC1Q8N443 379 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 OR6J1Q8NGC5 347 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 NLRP7Q8WX94 980 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 SAR1AQ9NR31 198 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 HMGXB4Q9UGU5 601 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 TBK1Q9UHD2 729 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 ENTPD5O75356 428 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 ITGB3P05106 788 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 RCN2Q14257 317 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 CCDC6Q16204 474 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 GSTA3Q16772 222 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 DUSP28Q4G0W2 176 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 SPOCD1Q6ZMY3 1216 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 PLEKHH3Q7Z736 793 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 JOSD2Q8TAC2 188 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 CXorf38Q8TB03 319 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 UCMAQ8WVF2 138 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 TINF2Q9BSI4 451 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 PCMTD2Q9NV79 361 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 PHTF1Q9UMS5 762 aa13.2□□□□□ -0.3
PCDHGA4-202ENST00000612927 TSPAN1O60635 241 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SLC18A1P54219 525 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 ADCY1Q08828 1119 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SLC10A6Q3KNW5 377 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 WDR72Q3MJ13 1102 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 ZNF667Q5HYK9 610 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 HP1BP3Q5SSJ5 553 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 FOXB2Q5VYV0 432 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CYP4F22Q6NT55 531 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 FAM47EQ6ZV65 393 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 PPP1R13LQ8WUF5 828 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CCDC77Q9BR77 488 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CHCHD3Q9NX63 227 aaKnown RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 TJP3O95049 919 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 HOXD8P13378 290 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CDH5P33151 784 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 DYNLT1P63172 113 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 FKBP1BP68106 108 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 NR1H3Q13133 447 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 KPNB1Q14974 876 aaKnown RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 KCNT1Q5JUK3 1230 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SNX30Q5VWJ9 437 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 C4orf50Q6ZRC1 276 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SRRM1Q8IYB3 904 aaKnown RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 CYP4X1Q8N118 509 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 EMC1Q8N766 993 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 KLHL23Q8NBE8 558 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 SLC4A7Q9Y6M7 1214 aa13.19□□□□□ -0.3
PCDHGA4-202ENST00000612927 hCG_1818297A0A087WSY0 165 aa13.18□□□□□ -0.3
PCDHGA4-202ENST00000612927 ASMTLO95671 621 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms