RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 TM9SF1O15321 606 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 B4GALT5O43286 388 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 NPM3O75607 178 aaKnown RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 MTA2O94776 668 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 NDST1P52848 882 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 FKBP1AP62942 108 aaKnown RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 TTLL4Q14679 1199 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 TAF5Q15542 800 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 DBN1Q16643 649 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 PTPN20Q4JDL3 420 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 BOLA3Q53S33 107 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC45A4Q5BKX6 768 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 C1orf220Q5T0J3 134 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 FNBP1LQ5T0N5 605 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 PLEKHA7Q6IQ23 1121 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SCUBE1Q8IWY4 988 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 C12orf50Q8NA57 414 aaPredicted RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 USP33Q8TEY7 942 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 PPP1R13LQ8WUF5 828 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 CRYGNQ8WXF5 182 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 OXNAD1Q96HP4 312 aaPredicted RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 WNK4Q96J92 1243 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 MAP3K20Q9NYL2 800 aaKnown RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 ACTL7BQ9Y614 415 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC4A7Q9Y6M7 1214 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 A0A087WZ62 844 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SPAG6O75602 509 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 MICAL2O94851 1124 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC4A1P02730 911 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 HMGCRP04035 888 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 ABCG1P45844 678 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 BIRC2Q13490 618 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 ZNF268Q14587 947 aaPredicted RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC39A4Q6P5W5 647 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SPATA24Q86W54 205 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 SCG3Q8WXD2 468 aaKnown RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 MMP19Q99542 508 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 FDXACB1Q9BRP7 624 aaPredicted RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 ADAM7Q9H2U9 754 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 Q9H521 79 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 AAASQ9NRG9 546 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 ARL8BQ9NVJ2 186 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 KLK14Q9P0G3 267 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 TSPAN16Q9UKR8 245 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 GRID1Q9ULK0 1009 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 COQ4Q9Y3A0 265 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 MRPL42Q9Y6G3 142 aaKnown RBP7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 CACNA1SQ13698 1873 aa7.13□□□□□ -1.27
SYNPO2-206ENST00000610556 A0A0B4J269 797 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 TCRBV9S1A1TA0A576 114 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 PDE5AO76074 875 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ASS1P00966 412 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ABHD2P08910 425 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ENO3P13929 434 aaPredicted RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 GDF10P55107 478 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 TMEM132BQ14DG7 1078 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 DNAL1Q4LDG9 190 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 EMC10Q5UCC4 262 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 EEF1DP3Q658K8 133 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 IL31Q6EBC2 164 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 IZUMO2Q6UXV1 221 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ALYREFQ86V81 257 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 BEST2Q8NFU1 509 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 SPDYE1Q8NFV5 336 aaPredicted RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 MIPOL1Q8TD10 442 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 TFAP2BQ92481 460 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ZNF669Q96BR6 464 aaPredicted RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 APOPT1Q96IL0 206 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 EPB41L4BQ9H329 900 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 SMARCAD1Q9H4L7 1026 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 GTSE1Q9NYZ3 720 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 ADA2Q9NZK5 511 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 TJP2Q9UDY2 1190 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 PACSIN3Q9UKS6 424 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 SYNPO2Q9UMS6 1093 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 RPS6KL1Q9Y6S9 549 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 hCG_2014768A0A024R1R8 64 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 GOLGA8QA0A0J9YX86 632 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 GOLGA8OA6NCC3 632 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 GOLGA8NF8WBI6 632 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 APOC4-APOC2K7ER74 178 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 HUS1O60921 280 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 APOC2P02655 101 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 NFICP08651 508 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 UBA1P22314 1058 aaKnown RBP7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 SULT1E1P49888 294 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 TGFB2P61812 414 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 BST1Q10588 318 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 PRPSAP1Q14558 356 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 FSCBQ5H9T9 825 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 POLNQ7Z5Q5 900 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 CLNKQ7Z7G1 428 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 AFAP1L2Q8N4X5 818 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 EFCAB3Q8N7B9 438 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 CPT1BQ92523 772 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 CD101Q93033 1021 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 SGF29Q96ES7 293 aa7.12□□□□□ -1.27
SYNPO2-206ENST00000610556 DDX50Q9BQ39 737 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms