RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 ADGRG6Q86SQ4 1221 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 RFX6Q8HWS3 928 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 CTAGE3PQ8IX95 158 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 CFAP36Q96G28 342 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 RMDN3Q96TC7 470 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 PDCD2LQ9BRP1 358 aa18.72■□□□□ 0.59
SPC24-206ENST00000592540 SEPT9Q9UHD8 586 aaPredicted RBP18.72■□□□□ 0.59
SPC24-206ENST00000592540 CLRN2A0PK11 232 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 APOC4-APOC2K7ER74 178 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 CYB561D2O14569 222 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 MCF2LO15068 1137 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 AVILO75366 819 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 KRT37O76014 449 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 APOC2P02655 101 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 ABCD1P33897 745 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 CPOXP36551 454 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 KCNJ11Q14654 390 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 AAGABQ6PD74 315 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 MARK2Q7KZI7 788 aaKnown RBP18.71■□□□□ 0.59
SPC24-206ENST00000592540 PDSS2Q86YH6 399 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 CRLF3Q8IUI8 442 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 KIAA0319LQ8IZA0 1049 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 ATP6V0A1Q93050 837 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 DTNBP1Q96EV8 351 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 NDNQ99608 321 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 RAVER2Q9HCJ3 691 aaKnown RBP18.71■□□□□ 0.59
SPC24-206ENST00000592540 ZDHHC7Q9NXF8 308 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 TMOD2Q9NZR1 351 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 TTLL3Q9Y4R7 772 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 CNTNAP2Q9UHC6 1331 aa18.71■□□□□ 0.59
SPC24-206ENST00000592540 A0A088AWK7 358 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 ATP5BP06576 529 aaKnown RBP18.71■□□□□ 0.58
SPC24-206ENST00000592540 SERPINA6P08185 405 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 CDH5P33151 784 aaPredicted RBP18.71■□□□□ 0.58
SPC24-206ENST00000592540 UBAP2LQ14157 1087 aaKnown RBP18.71■□□□□ 0.58
SPC24-206ENST00000592540 CFAP157Q5JU67 520 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 SWSAP1Q6NVH7 229 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 NUDCD3Q8IVD9 361 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 ST13P4Q8IZP2 240 aaPredicted RBP18.71■□□□□ 0.58
SPC24-206ENST00000592540 GSTCDQ8NEC7 633 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 OR6Y1Q8NGX8 325 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 JOSD2Q8TAC2 188 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 FAM172AQ8WUF8 416 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 RILPQ96NA2 401 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 OLFM3Q96PB7 478 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 MSTO1Q9BUK6 570 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 IMPG2Q9BZV3 1241 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 SLC13A1Q9BZW2 595 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 C20orf27Q9GZN8 174 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 S100A14Q9HCY8 104 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 CYP26B1Q9NR63 512 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 PXMP2Q9NR77 195 aa18.71■□□□□ 0.58
SPC24-206ENST00000592540 HBS1LQ9Y450 684 aaKnown RBP18.71■□□□□ 0.58
SPC24-206ENST00000592540 CXorf49A8MYA2 514 aaPredicted RBP18.7■□□□□ 0.58
SPC24-206ENST00000592540 RFPL1O75677 317 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 EIF4BP23588 611 aaKnown RBP18.7■□□□□ 0.58
SPC24-206ENST00000592540 RASSF3Q86WH2 238 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 SHKBP1Q8TBC3 707 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 SPATA18Q8TC71 538 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 HAPLN3Q96S86 360 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 MAP3K20Q9NYL2 800 aaKnown RBP18.7■□□□□ 0.58
SPC24-206ENST00000592540 ZNF180Q9UJW8 692 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 SOX13Q9UN79 622 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 COMMD3-BMI1R4GMX3 469 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 SIP14410 1827 aa18.7■□□□□ 0.58
SPC24-206ENST00000592540 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.69■□□□□ 0.58
SPC24-206ENST00000592540 A0A0B4J269 797 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 MEI4A8MW99 385 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 SNNO75324 88 aaPredicted RBP18.69■□□□□ 0.58
SPC24-206ENST00000592540 LDHAP00338 332 aaKnown RBP18.69■□□□□ 0.58
SPC24-206ENST00000592540 CST3P01034 146 aaPredicted RBP18.69■□□□□ 0.58
SPC24-206ENST00000592540 KRT3P12035 628 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 CCNFP41002 786 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 SLFN12LQ6IEE8 588 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 DHDDSQ86SQ9 333 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 KCTD6Q8NC69 237 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 TFAP2BQ92481 460 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 UBE2OQ9C0C9 1292 aaKnown RBP18.69■□□□□ 0.58
SPC24-206ENST00000592540 SDR42E2A6NKP2 422 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 ASS1P00966 412 aaKnown RBP18.69■□□□□ 0.58
SPC24-206ENST00000592540 PDE1BQ01064 536 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 HIC1Q14526 733 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 SEZ6Q53EL9 994 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.69■□□□□ 0.584e-14■□□□□ 9
SPC24-206ENST00000592540 FAM151AQ8WW52 585 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 EBF4Q9BQW3 602 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 CISHQ9NSE2 258 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 PCDHGC3Q9UN70 934 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 TELO2Q9Y4R8 837 aa18.69■□□□□ 0.58
SPC24-206ENST00000592540 DKC1O60832 514 aaKnown RBP eCLIP18.68■□□□□ 0.58
SPC24-206ENST00000592540 C6orf222P0C671 652 aaPredicted RBP18.68■□□□□ 0.58
SPC24-206ENST00000592540 AOC1P19801 751 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 ROR1Q01973 937 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 WASHC5Q12768 1159 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 EFHC1Q5JVL4 640 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 LGSNQ5TDP6 509 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 ARHGEF16Q5VV41 709 aa18.68■□□□□ 0.58
SPC24-206ENST00000592540 DARS2Q6PI48 645 aaKnown RBP18.68■□□□□ 0.58
SPC24-206ENST00000592540 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms