RNA–Protein interactions for RNA: ENST00000590247.6

PDCD5-207, Transcript of programmed cell death 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD5, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-207ENST00000590247 TNFRSF10BO14763 440 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 OAS1P00973 400 aaKnown RBP20.39■□□□□ 0.85
PDCD5-207ENST00000590247 EGFP01133 1207 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 CNR2P34972 360 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 GALK1P51570 392 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 SRSF5Q13243 272 aaKnown RBP20.39■□□□□ 0.85
PDCD5-207ENST00000590247 LPAL2Q16609 132 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 SNX30Q5VWJ9 437 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 LAIR1Q6GTX8 287 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 SPOPLQ6IQ16 392 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 KCNK16Q96T55 309 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 MED10Q9BTT4 135 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 GMEB2Q9UKD1 530 aa20.39■□□□□ 0.85
PDCD5-207ENST00000590247 MYOFQ9NZM1 2061 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 IFNAR2P48551 515 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 MXI1P50539 228 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 TUBP50607 506 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 PUM1Q14671 1186 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDCD5-207ENST00000590247 HEATR6Q6AI08 1181 aaKnown RBP20.38■□□□□ 0.85
PDCD5-207ENST00000590247 DDX42Q86XP3 938 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDCD5-207ENST00000590247 FBXL13Q8NEE6 735 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 ELMO3Q96BJ8 720 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 P2RY13Q9BPV8 354 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 NT5C1AQ9BXI3 368 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 LINC00597Q9H2U6 94 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 APOBEC3GQ9HC16 384 aaKnown RBP20.38■□□□□ 0.85
PDCD5-207ENST00000590247 KRT82Q9NSB4 513 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 HMGXB4Q9UGU5 601 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 RAB23Q9ULC3 237 aa20.38■□□□□ 0.85
PDCD5-207ENST00000590247 SDK1Q7Z5N4 2213 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 AP1G2O75843 785 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 DRD1P21728 446 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 SLC5A3P53794 718 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 NR1H3Q13133 447 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 STIM1Q13586 685 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 SIM2Q14190 667 aaPredicted RBP20.37■□□□□ 0.85
PDCD5-207ENST00000590247 RSPO4Q2I0M5 234 aaPredicted RBP20.37■□□□□ 0.85
PDCD5-207ENST00000590247 FOXR2Q6PJQ5 311 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 PRR23BQ6ZRT6 265 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 WDR5BQ86VZ2 330 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 TTC16Q8NEE8 873 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 SLC2A14Q8TDB8 520 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 EZH1Q92800 747 aaPredicted RBP20.37■□□□□ 0.85
PDCD5-207ENST00000590247 FBXO32Q969P5 355 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 HNRNPABQ99729 332 aaKnown RBP20.37■□□□□ 0.85
PDCD5-207ENST00000590247 RNF38Q9H0F5 515 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 FBXO44Q9H4M3 255 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 PNPLA8Q9NP80 782 aa20.37■□□□□ 0.85
PDCD5-207ENST00000590247 SLC9A3R1O14745 358 aaPredicted RBP20.36■□□□□ 0.85
PDCD5-207ENST00000590247 PSMA7O14818 248 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 RNF40O75150 1001 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 CILPO75339 1184 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 RETP07949 1114 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 ZDHHC11BP0C7U3 371 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 CCDC130P13994 396 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 ANKRD40Q6AI12 368 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 ZMIZ2Q8NF64 920 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 DHTKD1Q96HY7 919 aaPredicted RBP20.36■□□□□ 0.85
PDCD5-207ENST00000590247 SMOQ99835 787 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 DUSP9Q99956 384 aaKnown RBP20.36■□□□□ 0.85
PDCD5-207ENST00000590247 RAB20Q9NX57 234 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 COQ4Q9Y3A0 265 aa20.36■□□□□ 0.85
PDCD5-207ENST00000590247 LEFTY2O00292 366 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 ATG13O75143 517 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 NFATC1O95644 943 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 FAM200BP0CF97 657 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 FBXO43Q4G163 708 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 DGLUCYQ7Z3D6 616 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 C12orf29Q8N999 325 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 SCAMP5Q8TAC9 235 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 CD101Q93033 1021 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 MMRN2Q9H8L6 949 aa20.35■□□□□ 0.85
PDCD5-207ENST00000590247 CCDC163A0A0D9SF12 145 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 ABL1P00519 1130 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 SPEM2Q0P670 501 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 IFRD2Q12894 506 aaPredicted RBP20.34■□□□□ 0.85
PDCD5-207ENST00000590247 HECTD3Q5T447 861 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 WHAMMQ8TF30 809 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 CYFIP2Q96F07 1278 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 EEF2KMTQ96G04 330 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 TWNKQ96RR1 684 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 METTL14Q9HCE5 456 aaKnown RBP20.34■□□□□ 0.85
PDCD5-207ENST00000590247 FAM49BQ9NUQ9 324 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 POLR3BQ9NW08 1133 aaPredicted RBP20.34■□□□□ 0.85
PDCD5-207ENST00000590247 ARMCX3Q9UH62 379 aaPredicted RBP20.34■□□□□ 0.85
PDCD5-207ENST00000590247 USP18Q9UMW8 372 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 CPQQ9Y646 472 aa20.34■□□□□ 0.85
PDCD5-207ENST00000590247 PRR5-ARHGAP8B1AHC4 643 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 LRP3O75074 770 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 BEST1O76090 585 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 PXNP49023 591 aaPredicted RBP20.33■□□□□ 0.85
PDCD5-207ENST00000590247 PMS1P54277 932 aaKnown RBP20.33■□□□□ 0.85
PDCD5-207ENST00000590247 ARHGAP8P85298 464 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 LMNB2Q03252 620 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 ORC1Q13415 861 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 GAB4Q2WGN9 574 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 CLEC20AQ6ZU45 233 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 CCDC26Q8TAB7 109 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 SEMA4DQ92854 862 aa20.33■□□□□ 0.85
PDCD5-207ENST00000590247 ERCC4Q92889 916 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms