RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PDK4Q16654 411 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 EPC2Q52LR7 807 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 ERO1BQ86YB8 467 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 DIS3LQ8TF46 1054 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 PDCD6IPQ8WUM4 868 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 TFB1MQ8WVM0 346 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 TAF4O00268 1085 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 ZNF197O14709 1029 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 RPS6KA3P51812 740 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 DHRSXQ8N5I4 330 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 DKK3Q9UBP4 350 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 RPS6KL1Q9Y6S9 549 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 MGRN1O60291 552 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 CAPN1P07384 714 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 LCP1P13796 627 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 ADRA1DP25100 572 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 ACOT2P49753 483 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 PRKAA1Q13131 559 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 CCDC33Q8N5R6 958 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 NIF3L1Q9GZT8 377 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 GALNT8Q9NY28 637 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 PCYOX1Q9UHG3 505 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 SUPT3HB4E1H0 165 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 EEF2KO00418 725 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 PROCP04070 461 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 MYBPC2Q14324 1141 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 PDK2Q15119 407 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 ANO4Q32M45 955 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 TMEM121Q9BTD3 319 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 UBE2Q2LH0YL09 131 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 VIL1P09327 827 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 NFYCQ13952 458 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 QPCTQ16769 361 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 SPDYAQ5MJ70 313 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 KIAA0895Q8NCT3 520 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 COPS7BQ9H9Q2 264 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 NCKIPSDQ9NZQ3 722 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 CROTQ9UKG9 612 aa15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 HBS1LQ9Y450 684 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-214ENST00000589677 PGM3O95394 542 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 ABHD2P08910 425 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 TGM2P21980 687 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 JAK1P23458 1154 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 PURAQ00577 322 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 NR1D2Q14995 579 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 TAS2R42Q7RTR8 314 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 THEM5Q8N1Q8 247 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 ST13P5Q8NFI4 369 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 RORBQ92753 470 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 VPS33AQ96AX1 596 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 ZNF518BQ9C0D4 1074 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 NDFIP2Q9NV92 336 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 RUVBL2Q9Y230 463 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 CNOT3O75175 753 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 FESP07332 822 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 RPA3P35244 121 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 CUL2Q13617 745 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 SZRD1Q7Z422 152 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 SLC5A5Q92911 643 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 CDRT15Q96T59 188 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 POLE3Q9NRF9 147 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 SIK3Q9Y2K2 1263 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 PTPRUQ92729 1446 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 UBDO15205 165 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 MPOP05164 745 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 MUTP22033 750 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 CDH3P22223 829 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 ARHGEF19Q8IW93 802 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 DEPDC7Q96QD5 511 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 APOL4Q9BPW4 351 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 THUMPD3Q9BV44 507 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 FHDC1Q9C0D6 1143 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 C6orf203Q9P0P8 240 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 C2CD2LO14523 706 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 TOMM70O94826 608 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 CLEC16AQ2KHT3 1053 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 FUT11Q495W5 492 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 RIPOR1Q6ZS17 1223 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 UNC45BQ8IWX7 931 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 GIPC3Q8TF64 312 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 RIT2Q99578 217 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 ZNF341Q9BYN7 854 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 LRRC40Q9H9A6 602 aa15.09■□□□□ 0.01
SMARCA4-214ENST00000589677 NBNO60934 754 aa15.08■□□□□ 0.01
SMARCA4-214ENST00000589677 PSMB9P28065 219 aa15.08■□□□□ 0.01
SMARCA4-214ENST00000589677 CENPLQ8N0S6 344 aaPredicted RBP15.08■□□□□ 0.01
SMARCA4-214ENST00000589677 POU5F2Q8N7G0 328 aa15.08■□□□□ 0.01
SMARCA4-214ENST00000589677 PPP1R14BQ96C90 147 aa15.08■□□□□ 0.01
SMARCA4-214ENST00000589677 PPP1R16BQ96T49 567 aa15.08■□□□□ 0.01
SMARCA4-214ENST00000589677 DPPA5A6NC42 116 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 C5orf58C9J3I9 102 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 SLC37A4O43826 429 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 LDLRP01130 860 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 ATP6V1B2P21281 511 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 CRKP46108 304 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 GJA8P48165 433 aa15.08■□□□□ 0
SMARCA4-214ENST00000589677 CASP4P49662 377 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms