RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 CC2D1AQ6P1N0 951 aaPredicted RBP32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 RNF19BQ6ZMZ0 732 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 CLEC4CQ8WTT0 213 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 RNPC3Q96LT9 517 aaKnown RBP32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 CLSTN3Q9BQT9 956 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 ZBP1Q9H171 429 aa32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 AFF4Q9UHB7 1163 aaKnown RBP32.54■■■□□ 2.8
CAPNS1-206ENST00000588815 WDR27A2RRH5 827 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 RIOK3O14730 519 aaKnown RBP32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 TNFRSF10BO14763 440 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 DAB1O75553 588 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 CTSAP10619 480 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 SDC4P31431 198 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 PEX5P50542 639 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 RPL10AP62906 217 aaKnown RBP32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 YWHAZP63104 245 aaKnown RBP32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 CLUL1Q15846 466 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 PTPROQ16827 1216 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 GPRIN1Q7Z2K8 1008 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 SCN4BQ8IWT1 228 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 ATAD1Q8NBU5 361 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 ZNF461Q8TAF7 563 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 PGLYRP2Q96PD5 576 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 COMMD8Q9NX08 183 aa32.53■■■□□ 2.8
CAPNS1-206ENST00000588815 MTCL1Q9Y4B5 1905 aaKnown RBP32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 SRGAP2O75044 1071 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 HAPLN1P10915 354 aaPredicted RBP32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 PCK1P35558 622 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 RWDD2BP57060 319 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 CREG2Q8IUH2 290 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 KLHL23Q8NBE8 558 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 SPATA17Q96L03 361 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 DDX23Q9BUQ8 820 aaKnown RBP32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 FBXO44Q9H4M3 255 aa32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP32.52■■■□□ 2.8
CAPNS1-206ENST00000588815 C2CD2LO14523 706 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 GRAP2O75791 330 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 ABLIM3O94929 683 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 SLU7O95391 586 aaKnown RBP32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 MATKP42679 507 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 PAFAH1B1P43034 410 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 TUFMP49411 452 aaKnown RBP32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 NDUFV1P49821 464 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 SLC5A3P53794 718 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 RAB33AQ14088 237 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 HADHQ16836 314 aaKnown RBP32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 BEND5Q7L4P6 421 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 POLNQ7Z5Q5 900 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 NUP93Q8N1F7 819 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 MNS1Q8NEH6 495 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 COG1Q8WTW3 980 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 GOLGA1Q92805 767 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 FAM149B1Q96BN6 582 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 PSMB7Q99436 277 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 POPDC2Q9HBU9 364 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 RXFP1Q9HBX9 757 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 USTQ9Y2C2 406 aa32.51■■■□□ 2.79
CAPNS1-206ENST00000588815 LCHNA4D1U4 455 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 LINC01553A4QN01 128 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 C5orf67F2Z3F1 127 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 RB1P06400 928 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 CXCR5P32302 372 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 NOS2P35228 1153 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 DNA2P51530 1060 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 CDR1P51861 262 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 UBE3AQ05086 875 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 TAF5Q15542 800 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 C9orf50Q5SZB4 431 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 RPGRIP1Q96KN7 1286 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 SAMD11Q96NU1 681 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 RRN3Q9NYV6 651 aa32.5■■■□□ 2.79
CAPNS1-206ENST00000588815 LILRB3O75022 631 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 CTNNB1P35222 781 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 CCDC181Q5TID7 509 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 TRNP1Q6NT89 227 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 RASGEF1CQ8N431 466 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 KRT35Q92764 455 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 SLC2A13Q96QE2 648 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 TTC7AQ9ULT0 858 aaPredicted RBP32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 STAP1Q9ULZ2 295 aa32.49■■■□□ 2.79
CAPNS1-206ENST00000588815 ADAM12O43184 909 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 LRCH4O75427 683 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 RTN3O95197 1032 aaPredicted RBP32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 VNN2O95498 520 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 LTFP02788 710 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 USP17L7P0C7H9 530 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 ATF2P15336 505 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 SHHQ15465 462 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 MGAT5BQ3V5L5 792 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 CCDC14Q49A88 953 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 ACTRT1Q8TDG2 376 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 ALG3Q92685 438 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 IL37Q9NZH6 218 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 ZNF185O15231 689 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 KRT7P08729 469 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 RPL17P18621 184 aaKnown RBP32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 DUSP4Q13115 394 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 STRADAQ7RTN6 431 aa32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 ZNF572Q7Z3I7 529 aaPredicted RBP32.48■■■□□ 2.79
CAPNS1-206ENST00000588815 CPNE8Q86YQ8 564 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms