RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 IER5LQ5T953 404 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 GJB7Q6PEY0 223 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 LCLAT1Q6UWP7 414 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 TFAP2BQ92481 460 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 RNF38Q9H0F5 515 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 VPS16Q9H269 839 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 TBC1D17Q9HA65 648 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 HEBP1Q9NRV9 189 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 ARHGAP26Q9UNA1 814 aa19.83■□□□□ 0.77
ERCC1-207ENST00000588738 ARNTLO00327 626 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 XPO1O14980 1071 aaKnown RBP19.82■□□□□ 0.76
ERCC1-207ENST00000588738 OLFM2O95897 454 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 AVPR2P30518 371 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 TUBP50607 506 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 SLC7A9P82251 487 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 APBA1Q02410 837 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 PDE4CQ08493 712 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 SMYD5Q6GMV2 418 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 PIGZQ86VD9 579 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 TTC16Q8NEE8 873 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 UBA3Q8TBC4 463 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 ZFYVE19Q96K21 471 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 SIX2Q9NPC8 291 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 GKN1Q9NS71 199 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.82■□□□□ 0.76
ERCC1-207ENST00000588738 USP3Q9Y6I4 520 aa19.82■□□□□ 0.76
ERCC1-207ENST00000588738 KIF26AQ9ULI4 1882 aaPredicted RBP19.82■□□□□ 0.76
ERCC1-207ENST00000588738 CYP26A1O43174 497 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 SETSIPP0DME0 302 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 GLULP15104 373 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 TCF3P15923 654 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 BRD2P25440 801 aaKnown RBP19.81■□□□□ 0.76
ERCC1-207ENST00000588738 USP8P40818 1118 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 PSEN1P49768 467 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 ZNF77Q15935 545 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 RAB41Q5JT25 222 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 TPRG1Q6ZUI0 275 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 CCDC186Q7Z3E2 898 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 AOPEPQ8N6M6 819 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 SH3RF2Q8TEC5 729 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 BPIFA3Q9BQP9 254 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 DNAJC12Q9UKB3 198 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 HCN4Q9Y3Q4 1203 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 COL4A2P08572 1712 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 KMT2EQ8IZD2 1858 aa19.81■□□□□ 0.76
ERCC1-207ENST00000588738 KANSL1LA0AUZ9 987 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 SMTNL1A8MU46 457 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 COCHO43405 550 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 MED7O43513 233 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 MBL2P11226 248 aaPredicted RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 AOC1P19801 751 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 COL9A1P20849 921 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 PLA2G4AP47712 749 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 KPNA1P52294 538 aaPredicted RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 VCPP55072 806 aaKnown RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 MLLT6P55198 1093 aaPredicted RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 KCNMA1Q12791 1236 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 USP4Q13107 963 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 MTF1Q14872 753 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 NCAPHQ15003 741 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 PKDCCQ504Y2 493 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 FKBP15Q5T1M5 1219 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 CWF19L1Q69YN2 538 aaKnown RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 ZNF852Q6ZMS4 543 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 DDX42Q86XP3 938 aaKnown RBP eCLIP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 SHC3Q92529 594 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 FAM83CQ9BQN1 747 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 ZSWIM1Q9BR11 485 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 DDX23Q9BUQ8 820 aaKnown RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 NACA2Q9H009 215 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 CCSER2Q9H7U1 834 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 LRRC4Q9HBW1 653 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 LIMA1Q9UHB6 759 aaKnown RBP19.8■□□□□ 0.76
ERCC1-207ENST00000588738 SIT1Q9Y3P8 196 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 CPQQ9Y646 472 aa19.8■□□□□ 0.76
ERCC1-207ENST00000588738 A0A1W2PQH9 124 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 SYCE3A1L190 88 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 M0QYV0 167 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 LEFTY2O00292 366 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 TULP2O00295 520 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 MAN2B1O00754 1011 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 TLR5O60602 858 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 CALCAP01258 141 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 ZNF18P17022 549 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 PGFP49763 221 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 ZNF165P49910 485 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 TKTL1P51854 596 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 PDGFRLQ15198 375 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 KLHDC7AQ5VTJ3 777 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 RIN3Q8TB24 985 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 SLC35F5Q8WV83 523 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 KCTD13Q8WZ19 329 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 MSANTD3Q96H12 275 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 NELL2Q99435 816 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 FUCA2Q9BTY2 467 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 C8orf33Q9H7E9 229 aaPredicted RBP19.79■□□□□ 0.76
ERCC1-207ENST00000588738 CYLDQ9NQC7 956 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 SMPD4Q9NXE4 827 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 GTSE1Q9NYZ3 720 aa19.79■□□□□ 0.76
ERCC1-207ENST00000588738 NAGPAQ9UK23 515 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms