RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 DUSP16Q9BY84 665 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 RNF38Q9H0F5 515 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 CYLDQ9NQC7 956 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM4-209ENST00000588483 PRMT8Q9NR22 394 aaPredicted RBP11.1□□□□□ -0.63
TPM4-209ENST00000588483 GKN1Q9NS71 199 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 FBXO4Q9UKT5 387 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 SCML2Q9UQR0 700 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
TPM4-209ENST00000588483 RIF1Q5UIP0 2472 aaKnown RBP11.1□□□□□ -0.63
TPM4-209ENST00000588483 ZFHX2Q9C0A1 2572 aaPredicted RBP11.1□□□□□ -0.63
TPM4-209ENST00000588483 FRYLO94915 3013 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 OTOL1A6NHN0 477 aaPredicted RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 LEFTY2O00292 366 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 TRDMT1O14717 391 aaKnown RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 CCDC192P0DO97 292 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 ACO1P21399 889 aaKnown RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 ADORA2BP29275 332 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 KIF11P52732 1056 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 STX17P56962 302 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 EML3Q32P44 896 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 DGKKQ5KSL6 1271 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 HECTD3Q5T447 861 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 CC2D1AQ6P1N0 951 aaPredicted RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 KLHDC10Q6PID8 442 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 RBM43Q6ZSC3 357 aaKnown RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 GPRIN1Q7Z2K8 1008 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM4-209ENST00000588483 SYNPOQ8N3V7 929 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 ATOH1Q92858 354 aaPredicted RBP11.09□□□□□ -0.63
TPM4-209ENST00000588483 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 GBP4Q96PP9 640 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 NUP62CLQ9H1M0 184 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM4-209ENST00000588483 CPQQ9Y646 472 aa11.09□□□□□ -0.63
TPM4-209ENST00000588483 FAM186AA6NE01 2351 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 COCHO43405 550 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 PAPSS2O95340 614 aaPredicted RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 AFPP02771 609 aaKnown RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 PAEPP09466 180 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 TDGF1P13385 188 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 ERCC5P28715 1186 aaPredicted RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 SOX9P48436 509 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 KPNA1P52294 538 aaPredicted RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 AMPD2Q01433 879 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 LRRC32Q14392 662 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 ZNF394Q53GI3 561 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 TMEM196Q5HYL7 178 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 TRIM68Q6AZZ1 485 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 IRF2BP1Q8IU81 584 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 CPA6Q8N4T0 437 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 ANKRD52Q8NB46 1076 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 EHBP1Q8NDI1 1231 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 JAKMIP2Q96AA8 810 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 HEXIM2Q96MH2 286 aaKnown RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 IPO9Q96P70 1041 aaKnown RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 ECT2Q9H8V3 914 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 TLR8Q9NR97 1041 aaKnown RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 DUS2Q9NX74 493 aaKnown RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 GMIPQ9P107 970 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 NDRG2Q9UN36 371 aaKnown RBP11.08□□□□□ -0.64
TPM4-209ENST00000588483 CNTN6Q9UQ52 1028 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
TPM4-209ENST00000588483 ZNF292O60281 2723 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 E2F8A0AVK6 867 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 GTPBP10A4D1E9 387 aaKnown RBP11.07□□□□□ -0.64
TPM4-209ENST00000588483 O00370 1275 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 SLC9A3R1O14745 358 aaPredicted RBP11.07□□□□□ -0.64
TPM4-209ENST00000588483 NFATC1O95644 943 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 SP9P0CG40 484 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 VDRP11473 427 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 ARSAP15289 507 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 GJA4P35212 333 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 IFNAR2P48551 515 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 PGFP49763 221 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 PSEN1P49768 467 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 MRE11P49959 708 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 ZNF132P52740 706 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 BCAT1P54687 386 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
TPM4-209ENST00000588483 MTAPQ13126 283 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 GAS6Q14393 721 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 DPCR1Q3MIW9 517 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 SGO2Q562F6 1265 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 SCML4Q8N228 414 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 OTUB2Q96DC9 234 aa11.07□□□□□ -0.64
TPM4-209ENST00000588483 CNOT6LQ96LI5 555 aaKnown RBP11.07□□□□□ -0.64
TPM4-209ENST00000588483 FAM126AQ9BYI3 521 aaPredicted RBP11.07□□□□□ -0.64
TPM4-209ENST00000588483 SEMA4AQ9H3S1 761 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms