RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 ROR1Q01973 937 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SLC25A11Q02978 314 aaKnown RBP12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ITIH3Q06033 890 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 COL13A1Q5TAT6 717 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LRRC38Q5VT99 294 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PM20D1Q6GTS8 502 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CC2D1AQ6P1N0 951 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RHOT1Q8IXI2 618 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FBXO22Q8NEZ5 403 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ACTRT1Q8TDG2 376 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 IRGQQ8WZA9 623 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 STK39Q9UEW8 545 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TTC7AQ9ULT0 858 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PCDHB12Q9Y5F1 795 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 USP3Q9Y6I4 520 aa12.51□□□□□ -0.41
TNFRSF11A-203ENST00000587697 WDR27A2RRH5 827 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LCHNA4D1U4 455 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TRIM66O15016 1216 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TADA3O75528 432 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FGF18O76093 207 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ZBED1O96006 694 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HAPLN1P10915 354 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TCF4P15884 667 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PDGFRAP16234 1089 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SDC4P31431 198 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GTF2F1P35269 517 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PCK1P35558 622 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 GRIK1P39086 918 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RWDD2BP57060 319 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RNASE9P60153 205 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CCDC14Q49A88 953 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RNF19BQ6ZMZ0 732 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 BNIPLQ7Z465 357 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 POLNQ7Z5Q5 900 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 KATNAL2Q8IYT4 538 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TTC9BQ8N6N2 239 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MNS1Q8NEH6 495 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NDRG1Q92597 394 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DPF3Q92784 378 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MS4A14Q96JA4 679 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RPGRIP1Q96KN7 1286 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RNPC3Q96LT9 517 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CLSTN3Q9BQT9 956 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DDX23Q9BUQ8 820 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ZBP1Q9H171 429 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CRISPLD1Q9H336 500 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 EHD2Q9NZN4 543 aa12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HELZP42694 1942 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-203ENST00000587697 YJEFN3A6XGL0 299 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 E7ENQ6 273 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTIFO43310 598 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 TLL1O43897 1013 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CEP104O60308 925 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LILRB3O75022 631 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ABLIM3O94929 683 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 URODP06132 367 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FYNP06241 537 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 USP17L7P0C7H9 530 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PYGMP11217 842 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RPL17P18621 184 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 OR1D2P34982 312 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 MATKP42679 507 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SLC5A3P53794 718 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ARPP19P56211 112 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 YWHAZP63104 245 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 C15orf59Q2T9L4 293 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CCDC181Q5TID7 509 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 OTUD1Q5VV17 481 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 KIAA1841Q6NSI8 718 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HFE2Q6ZVN8 426 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RSRC2Q7L4I2 434 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SCN4BQ8IWT1 228 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 DEFB106AQ8N104 65 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 VPS52Q8N1B4 723 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ATAD1Q8NBU5 361 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 NT5C3BQ969T7 300 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CFAP57Q96MR6 1250 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SMARCAL1Q9NZC9 954 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 IL37Q9NZH6 218 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF11A-203ENST00000587697 FAM92AA1XBS5 289 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTAGE15A4D2H0 777 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 EFCAB8A8MWE9 144 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 PGRMC1O00264 195 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 RNF8O76064 485 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 ENDOD1O94919 500 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 LTFP02788 710 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTAGE8P0CG41 777 aa12.48□□□□□ -0.41
TNFRSF11A-203ENST00000587697 CTSAP10619 480 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms