RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LCLAT1Q6UWP7 414 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 YAF2Q8IY57 180 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 RBBP8NLQ8NC74 664 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-222ENST00000584908 RIN3Q8TB24 985 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 TFAP2BQ92481 460 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 FAM83CQ9BQN1 747 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 TBC1D17Q9HA65 648 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 SIX2Q9NPC8 291 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 UBE2TQ9NPD8 197 aaPredicted RBP17.16■□□□□ 0.34
ERBB2-222ENST00000584908 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
ERBB2-222ENST00000584908 TSPAN16Q9UKR8 245 aa17.16■□□□□ 0.34
ERBB2-222ENST00000584908 CD19P15391 556 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 COL9A1P20849 921 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 VCPP55072 806 aaKnown RBP17.15■□□□□ 0.34
ERBB2-222ENST00000584908 MFAP3P55082 362 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 SLC8A3P57103 927 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 ZXDBP98169 803 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 BST2Q10589 180 aaKnown RBP17.15■□□□□ 0.34
ERBB2-222ENST00000584908 CNGA2Q16280 664 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 CCDC186Q7Z3E2 898 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 ZNF276Q8N554 614 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 TMEM105Q8N8V8 129 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 MSANTD3Q96H12 275 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 ZSWIM1Q9BR11 485 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 OSBPL6Q9BZF3 934 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 HEBP1Q9NRV9 189 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 GMIPQ9P107 970 aa17.15■□□□□ 0.34
ERBB2-222ENST00000584908 CHORDC1Q9UHD1 332 aaPredicted RBP17.15■□□□□ 0.34
ERBB2-222ENST00000584908 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.15■□□□□ 0.34
ERBB2-222ENST00000584908 KANSL1LA0AUZ9 987 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 XPO1O14980 1071 aaKnown RBP17.14■□□□□ 0.33
ERBB2-222ENST00000584908 SETSIPP0DME0 302 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 PLA2G4AP47712 749 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 NCAPHQ15003 741 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 MEA1Q16626 185 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 GOLGA7BQ2TAP0 167 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 HECTD3Q5T447 861 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 PIGZQ86VD9 579 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 FLCNQ8NFG4 579 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 SHC3Q92529 594 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 CYLDQ9NQC7 956 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 TLR8Q9NR97 1041 aaKnown RBP17.14■□□□□ 0.33
ERBB2-222ENST00000584908 HESX1Q9UBX0 185 aa17.14■□□□□ 0.33
ERBB2-222ENST00000584908 CACNA1HO95180 2353 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 LRRC10BA6NIK2 292 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 MAN2B1O00754 1011 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 CYP26A1O43174 497 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 COCHO43405 550 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 PI15O43692 258 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 LETM1O95202 739 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-222ENST00000584908 ZNF18P17022 549 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 PGFP49763 221 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 PSEN1P49768 467 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 APBA1Q02410 837 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 PDE4CQ08493 712 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 KCNMA1Q12791 1236 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 MTF1Q14872 753 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 KRT31Q15323 416 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 PM20D1Q6GTS8 502 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 GJB7Q6PEY0 223 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 C1orf228Q6PIY5 440 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 TPRG1Q6ZUI0 275 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 PJA1Q8NG27 643 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 CSGALNACT1Q8TDX6 532 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 SH3RF2Q8TEC5 729 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 KCTD13Q8WZ19 329 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 ZFYVE19Q96K21 471 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 ZFRQ96KR1 1074 aaKnown RBP17.13■□□□□ 0.33
ERBB2-222ENST00000584908 NELL2Q99435 816 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 FUCA2Q9BTY2 467 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 HSD3B7Q9H2F3 369 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 C8orf33Q9H7E9 229 aaPredicted RBP17.13■□□□□ 0.33
ERBB2-222ENST00000584908 GKN1Q9NS71 199 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 HCN4Q9Y3Q4 1203 aa17.13■□□□□ 0.33
ERBB2-222ENST00000584908 BECN2A8MW95 431 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 TULP2O00295 520 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 ABL1P00519 1130 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 PDGFRLQ15198 375 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 KLHDC10Q6PID8 442 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 ZNF852Q6ZMS4 543 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 DDX42Q86XP3 938 aaKnown RBP eCLIP17.12■□□□□ 0.33
ERBB2-222ENST00000584908 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 SCML4Q8N228 414 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 SLC35F5Q8WV83 523 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 OSCP1Q8WVF1 389 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 PRRX2Q99811 253 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
ERBB2-222ENST00000584908 CCSER2Q9H7U1 834 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 LTB4R2Q9NPC1 389 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 HPS4Q9NQG7 708 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 OSER1Q9NX31 292 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 TAB2Q9NYJ8 693 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 LIMA1Q9UHB6 759 aaKnown RBP17.12■□□□□ 0.33
ERBB2-222ENST00000584908 CPQQ9Y646 472 aa17.12■□□□□ 0.33
ERBB2-222ENST00000584908 PIAS3Q9Y6X2 628 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms