RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 TOR4AQ9NXH8 423 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 FTSJ1Q9UET6 329 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
CASC3-208ENST00000583649 GTF3C4Q9UKN8 822 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 CELSR3Q9NYQ7 3312 aa11.89□□□□□ -0.51
CASC3-208ENST00000583649 ASXL3Q9C0F0 2248 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 DENND4CQ5VZ89 1909 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 BPTFQ12830 3046 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 A0A0B4J269 797 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 A0A1W2PQF6 199 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 TULP1O00294 542 aaPredicted RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 HOXC11O43248 304 aaPredicted RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 DFNA5O60443 496 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 TULP3O75386 442 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 IL18RAPO95256 599 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 C1SP09871 688 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 MBL2P11226 248 aaPredicted RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 ACADMP11310 421 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 ACTN2P35609 894 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 WASP42768 502 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 TRAPPC10P48553 1259 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 UCNP55089 124 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 LY6G5CQ5SRR4 150 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 GRAMD4Q6IC98 578 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 METTL3Q86U44 580 aaKnown RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 TMEM130Q8N3G9 435 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 NAT16Q8N8M0 369 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 TOE1Q96GM8 510 aaKnown RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 CDK5RAP3Q96JB5 506 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 NRSN2Q9GZP1 204 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 SMPD4Q9NXE4 827 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASC3-208ENST00000583649 FNDC3AQ9Y2H6 1198 aaKnown RBP11.88□□□□□ -0.51
CASC3-208ENST00000583649 PCDHGA1Q9Y5H4 931 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 PTPRDP23468 1912 aa11.88□□□□□ -0.51
CASC3-208ENST00000583649 GON4LQ3T8J9 2241 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 ZNF840PA6NDX5 716 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 LAD1O00515 517 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 WNT7AO00755 349 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 NPC1O15118 1278 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 PIGRP01833 764 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 IL12RB1P42701 662 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 CCT8P50990 548 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 NCKAP1LP55160 1127 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 CXADRP78310 365 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 MAPK7Q13164 816 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 ZRSR1Q15695 479 aaKnown RBP11.87□□□□□ -0.51
CASC3-208ENST00000583649 DCAF12L1Q5VU92 463 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 DHRS13Q6UX07 377 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 C12orf40Q86WS4 652 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 PDZD8Q8NEN9 1154 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
CASC3-208ENST00000583649 FGF11Q92914 225 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 KCNN1Q92952 543 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 MRGPRX1Q96LB2 322 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 NUP58Q9BVL2 599 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 GPR174Q9BXC1 333 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 HAPLN2Q9GZV7 340 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 NACA2Q9H009 215 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 IL21RQ9HBE5 538 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.51
CASC3-208ENST00000583649 PTPRBP23467 1997 aa11.87□□□□□ -0.51
CASC3-208ENST00000583649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
CASC3-208ENST00000583649 ANTXRLA6NF34 631 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 METTL12A8MUP2 240 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 B8ZZF3 427 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 K7ENM7 598 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 FAM189A1O60320 539 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 PCDHGA12O60330 932 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 SYNCRIPO60506 623 aaKnown RBP11.86□□□□□ -0.51
CASC3-208ENST00000583649 WISP1O95388 367 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 ACAT1P24752 427 aaKnown RBP11.86□□□□□ -0.51
CASC3-208ENST00000583649 ACOT2P49753 483 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 PTPRNQ16849 979 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 LURAP1LQ8IV03 231 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 ETFBKMTQ8IXQ9 262 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 IGSF22Q8N9C0 903 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 FAM181AQ8N9Y4 354 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 SKA1Q96BD8 255 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 GABRG3Q99928 467 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
CASC3-208ENST00000583649 SPHK2Q9NRA0 654 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 IGSF5Q9NSI5 407 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 DNAJC17Q9NVM6 304 aaKnown RBP11.86□□□□□ -0.51
CASC3-208ENST00000583649 WDR35Q9P2L0 1181 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 ODF2LQ9ULJ1 636 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 CEP192Q8TEP8 1941 aa11.86□□□□□ -0.51
CASC3-208ENST00000583649 CTDNEP1O95476 244 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms