RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 YAF2Q8IY57 180 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 SIX6OS1Q8N1H7 587 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 ARHGAP18Q8N392 663 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC44A3Q8N4M1 653 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 CELF5Q8N6W0 485 aaKnown RBP13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 DEPDC1BQ8WUY9 529 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 KCTD13Q8WZ19 329 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 SECISBP2LQ93073 1101 aaKnown RBP13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 IQCDQ96DY2 449 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 HSFY1Q96LI6 401 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZSWIM3Q96MP5 696 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 CDK5RAP1Q96SZ6 601 aaKnown RBP13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 KXD1Q9BQD3 176 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 NACA2Q9H009 215 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 CHORDC1Q9UHD1 332 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 RALAP11233 206 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 PSMC3P17980 439 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 HDCP19113 662 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 CLCN1P35523 988 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 SOX5P35711 763 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 TKTL1P51854 596 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZNF268Q14587 947 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 RAB41Q5JT25 222 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 HECTD3Q5T447 861 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 SNX30Q5VWJ9 437 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 TANGO2Q6ICL3 276 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 GPRIN1Q7Z2K8 1008 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZNF677Q86XU0 584 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 MFSD6LQ8IWD5 586 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 RNF214Q8ND24 703 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 STK32AQ8WU08 396 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC35F5Q8WV83 523 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 RSAD2Q8WXG1 361 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZSWIM1Q9BR11 485 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 ST7Q9NRC1 585 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 TDP1Q9NUW8 608 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 THG1LQ9NWX6 298 aaKnown RBP13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 GMIPQ9P107 970 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 AJAP1Q9UKB5 411 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 PCDHGC3Q9UN70 934 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 DUSP12Q9UNI6 340 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 BDP1A6H8Y1 2624 aa13.44□□□□□ -0.26
TRAPPC1-206ENST00000573989 C2orf78A6NCI8 922 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 PI4K2BG5E9Z4 385 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 NRG2O14511 850 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 FBXO21O94952 628 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZBED1O96006 694 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZDHHC11BP0C7U3 371 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 SRFP11831 508 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 CYP11B1P15538 503 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 GPD2P43304 727 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 JAM2P57087 298 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZXDAP98168 799 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 PFKPQ01813 784 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 ADIGQ0VDE8 80 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 SCML4Q8N228 414 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 GOLGA1Q92805 767 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 EDAQ92838 391 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 TRMT61BQ9BVS5 477 aaKnown RBP13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 EDEM3Q9BZQ6 932 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 LHX5Q9H2C1 402 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 CNGB3Q9NQW8 809 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 IFNKQ9P0W0 207 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
TRAPPC1-206ENST00000573989 TULP2O00295 520 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 EPHB6O15197 1021 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 TLR5O60602 858 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 GFPT2O94808 682 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 OAS1P00973 400 aaKnown RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 CALCAP01258 141 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 PNMA6AP0CW24 399 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 MBL2P11226 248 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 LCP1P13796 627 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 FERP16591 822 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 FCARP24071 287 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 ATP5C1P36542 298 aaKnown RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 VIPR2P41587 438 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 RGS7P49802 495 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 SLC7A9P82251 487 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 GOLGA8FQ08AF8 430 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 GOLGA8DPQ0D2H9 430 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 PM20D1Q6GTS8 502 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 PMF1Q6P1K2 205 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 CC2D1AQ6P1N0 951 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZNF276Q8N554 614 aa13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 ARL14EPQ8N8R7 260 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC1-206ENST00000573989 MSANTD4Q8NCY6 345 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms