RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TDGF1P13385 188 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 TCF3P15923 654 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 FNTBP49356 437 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 LRRC63Q05C16 580 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 DMWDQ09019 674 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 LPAL2Q16609 132 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 COBLL1Q53SF7 1204 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 HECTD3Q5T447 861 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 KLHL10Q6JEL2 608 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 KIAA2013Q8IYS2 634 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 DCLK2Q8N568 766 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 SUMF1Q8NBK3 374 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 NELL1Q92832 810 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 CD101Q93033 1021 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 HEXIM2Q96MH2 286 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 HNRNPABQ99729 332 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 FBXO44Q9H4M3 255 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 CCSER2Q9H7U1 834 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 FBRSL1Q9HCM7 1045 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 SMG5Q9UPR3 1016 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 CACNA1HO95180 2353 aa13.44□□□□□ -0.26
NPLOC4-213ENST00000573519 COCHO43405 550 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 CILPO75339 1184 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 IRF1P10914 325 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 DRD1P21728 446 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 UBE2HP62256 183 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 CBWD6Q4V339 395 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 CBWD3Q5JTY5 395 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 CBWD5Q5RIA9 395 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 PKN3Q6P5Z2 889 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 PRR23BQ6ZRT6 265 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 CLEC20AQ6ZU45 233 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 ELOA2Q8IYF1 753 aaPredicted RBP13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 SECISBP2LQ93073 1101 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 CSNK1G1Q9HCP0 422 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 TLR8Q9NR97 1041 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 COMMD8Q9NX08 183 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 ARMCX3Q9UH62 379 aaPredicted RBP13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 RAB23Q9ULC3 237 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 SLC8A2Q9UPR5 921 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 SH3BP1Q9Y3L3 701 aa13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 HELZP42694 1942 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-213ENST00000573519 K7ESF4 209 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 SLC9A3R1O14745 358 aaPredicted RBP13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 ATG13O75143 517 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 ACO1P21399 889 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 BMP6P22004 513 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 HOXC13P31276 330 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 CAMK4Q16566 473 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 CCDC40Q4G0X9 1142 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 PPP1R26Q5T8A7 1209 aaPredicted RBP13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 GPRIN1Q7Z2K8 1008 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 LONP2Q86WA8 852 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 RPLP0P6Q8NHW5 317 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 TATDN2Q93075 761 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 DHTKD1Q96HY7 919 aaPredicted RBP13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 ARID3AQ99856 593 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 IL37Q9NZH6 218 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 ANAPC1Q9H1A4 1944 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 VPS13AQ96RL7 3174 aa13.42□□□□□ -0.26
NPLOC4-213ENST00000573519 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 CYP26A1O43174 497 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 TLR5O60602 858 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 PAPSS2O95340 614 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 CYP17A1P05093 508 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 PPP1R2P41236 205 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 PXNP49023 591 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 PGFP49763 221 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 TUBP50607 506 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 SEC13P55735 322 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 LRMPQ12912 555 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 SRSF5Q13243 272 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 SIM2Q14190 667 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 DHCR24Q15392 516 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 FBXO43Q4G163 708 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 SNX30Q5VWJ9 437 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 ADGRG2Q8IZP9 1017 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 TTC39CQ8N584 583 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 NELFBQ8WX92 580 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 METTL14Q9HCE5 456 aaKnown RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 POLR3BQ9NW08 1133 aaPredicted RBP13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 TBC1D14Q9P2M4 693 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 GMEB2Q9UKD1 530 aa13.41□□□□□ -0.26
NPLOC4-213ENST00000573519 CACNA1IQ9P0X4 2223 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 E2F8A0AVK6 867 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 PPP1R3GB7ZBB8 358 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 HHLA1C9JL84 531 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 ADH1CP00326 375 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 ZDHHC11BP0C7U3 371 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 OPRD1P41143 372 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms