RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 GBP4Q96PP9 640 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 TARS2Q9BW92 718 aaKnown RBP12.08□□□□□ -0.48
CDH3-208ENST00000569036 STARD5Q9NSY2 213 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 USP36Q9P275 1121 aaKnown RBP12.08□□□□□ -0.48
CDH3-208ENST00000569036 SEPT3Q9UH03 358 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 ANKRD6Q9Y2G4 727 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 SSUH2Q9Y2M2 353 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 RAD54BQ9Y620 910 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
CDH3-208ENST00000569036 TCHHQ07283 1943 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 K7ENP7 123 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 LDOC1O95751 146 aaPredicted RBP12.07□□□□□ -0.48
CDH3-208ENST00000569036 NFICP08651 508 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 CXCL8P10145 99 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 CYP11B2P19099 503 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 SCN1AP35498 2009 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 SAFBQ15424 915 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDH3-208ENST00000569036 ZBTB6Q15916 424 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 DDR2Q16832 855 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 INO80CQ6PI98 192 aaPredicted RBP12.07□□□□□ -0.48
CDH3-208ENST00000569036 ETFBKMTQ8IXQ9 262 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 CHPFQ8IZ52 775 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 KIAA1958Q8N8K9 716 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 TERB1Q8NA31 727 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 IFT74Q96LB3 600 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 GABRG3Q99928 467 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 TCHPQ9BT92 498 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 MRPL4Q9BYD3 311 aaKnown RBP12.07□□□□□ -0.48
CDH3-208ENST00000569036 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 TMLHEQ9NVH6 421 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 UBQLN1Q9UMX0 589 aaKnown RBP12.07□□□□□ -0.48
CDH3-208ENST00000569036 PCDHB5Q9Y5E4 795 aa12.07□□□□□ -0.48
CDH3-208ENST00000569036 KCNJ18B7U540 433 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 SLC9A3R1O14745 358 aaPredicted RBP12.06□□□□□ -0.48
CDH3-208ENST00000569036 TULP3O75386 442 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 PRPF40AO75400 957 aaKnown RBP12.06□□□□□ -0.48
CDH3-208ENST00000569036 BAG4O95429 457 aaKnown RBP12.06□□□□□ -0.48
CDH3-208ENST00000569036 TPM2P07951 284 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 IFNAR1P17181 557 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 CYP3A5P20815 502 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 TLE1Q04724 770 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 LY6G5CQ5SRR4 150 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 LAYNQ6UX15 382 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 TAS1R3Q7RTX0 852 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 METTL3Q86U44 580 aaKnown RBP12.06□□□□□ -0.48
CDH3-208ENST00000569036 CACTIN-AS1Q8N1I8 211 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 NAT16Q8N8M0 369 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 DCBLD1Q8N8Z6 715 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 ZBTB45Q96K62 511 aaPredicted RBP12.06□□□□□ -0.48
CDH3-208ENST00000569036 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 CLCA2Q9UQC9 943 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 STARD13Q9Y3M8 1113 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 CACNA1DQ01668 2161 aa12.06□□□□□ -0.48
CDH3-208ENST00000569036 NUMA1Q14980 2115 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 TRIM24O15164 1050 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 DDIT3P35638 169 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 GRIA4P48058 902 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 PDE6CP51160 858 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 TERF1P54274 439 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
CDH3-208ENST00000569036 TEAD4Q15561 434 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 KCNT1Q5JUK3 1230 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 SDE2Q6IQ49 451 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 GATAD2AQ86YP4 633 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 FSIP1Q8NA03 581 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 RFFLQ8WZ73 363 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 SNX19Q92543 992 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 DEC1Q9P2X7 70 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 PCDHB1Q9Y5F3 818 aa12.05□□□□□ -0.48
CDH3-208ENST00000569036 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.05□□□□□ -0.48
CDH3-208ENST00000569036 POLQO75417 2590 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 TTC26A0AVF1 554 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 LAD1O00515 517 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 TRAK2O60296 914 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 DXOO77932 396 aaKnown RBP12.04□□□□□ -0.48
CDH3-208ENST00000569036 ITGB6P18564 788 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 CTSKP43235 329 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 RPL10AP62906 217 aaKnown RBP12.04□□□□□ -0.48
CDH3-208ENST00000569036 GAD2Q05329 585 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 NOLC1Q14978 699 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDH3-208ENST00000569036 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 GALNT17Q6IS24 598 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 DCP1BQ8IZD4 617 aaKnown RBP12.04□□□□□ -0.48
CDH3-208ENST00000569036 THEM5Q8N1Q8 247 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
CDH3-208ENST00000569036 PLEKHA5Q9HAU0 1116 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 TM9SF3Q9HD45 589 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 ITM2CQ9NQX7 267 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 SMPD4Q9NXE4 827 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 DSEQ9UL01 958 aa12.04□□□□□ -0.48
CDH3-208ENST00000569036 A0A1B0GTQ1 180 aa12.03□□□□□ -0.48
CDH3-208ENST00000569036 BLACEA4D250 179 aa12.03□□□□□ -0.48
CDH3-208ENST00000569036 ARHGEF35A5YM69 484 aa12.03□□□□□ -0.48
CDH3-208ENST00000569036 HOXC11O43248 304 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms