RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	BANF1	O75531	89 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	GJB1	P08034	283 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	YWHAG	P61981	247 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
PKM-222	ENST00000568883	PTK7	Q13308	1070 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	KCNJ11	Q14654	390 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	CHSY1	Q86X52	802 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	TRIM42	Q8IWZ5	723 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	TMEM192	Q8IY95	271 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	KIF2B	Q8N4N8	673 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	CXorf38	Q8TB03	319 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	TCP10L	Q8TDR4	215 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	MZB1	Q8WU39	189 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	SLC44A1	Q8WWI5	657 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	LRRC39	Q96DD0	335 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	APOPT1	Q96IL0	206 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	ANKRD27	Q96NW4	1050 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	TRIM55	Q9BYV6	548 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	IQCG	Q9H095	443 aa	Known RBP	13.21	□□□□□ -0.29
PKM-222	ENST00000568883	MANSC1	Q9H8J5	431 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	SLCO1B3	Q9NPD5	702 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	DPP3	Q9NY33	737 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	HMGXB4	Q9UGU5	601 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	TSPAN16	Q9UKR8	245 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	KCNH4	Q9UQ05	1017 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	CHMP2B	Q9UQN3	213 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	CHKB	Q9Y259	395 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883	DERA	Q9Y315	318 aa		13.21	□□□□□ -0.29
PKM-222	ENST00000568883		A0A087WZ62	844 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	TRDMT1	O14717	391 aa	Known RBP	13.21	□□□□□ -0.3
PKM-222	ENST00000568883	KRT37	O76014	449 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ZBED1	O96006	694 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	INSRR	P14616	1297 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ZFX	P17010	805 aa	Predicted RBP	13.21	□□□□□ -0.3
PKM-222	ENST00000568883	SDC4	P31431	198 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ELK3	P41970	407 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	NDST1	P52848	882 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	IGBP1	P78318	339 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	PPIL2	Q13356	520 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ORC1	Q13415	861 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	AMHR2	Q16671	573 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	SLC10A6	Q3KNW5	377 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	DCAF4L1	Q3SXM0	396 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	FAM183BP	Q6ZVS7	135 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	OTOA	Q7RTW8	1153 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	SESTD1	Q86VW0	696 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.21	□□□□□ -0.3
PKM-222	ENST00000568883	CNKSR2	Q8WXI2	1034 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF668	Q96K58	619 aa	Predicted RBP	13.21	□□□□□ -0.3
PKM-222	ENST00000568883	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF670	Q9BS34	389 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	CYLD	Q9NQC7	956 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	HESX1	Q9UBX0	185 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ZFP69B	Q9UJL9	534 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF180	Q9UJW8	692 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	GRID1	Q9ULK0	1009 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	TEX264	Q9Y6I9	313 aa		13.21	□□□□□ -0.3
PKM-222	ENST00000568883	BCLAF3	A2AJT9	711 aa	Known RBP	13.2	□□□□□ -0.3
PKM-222	ENST00000568883		E5RJQ4	531 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	MDM4	O15151	490 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	CAPN15	O75808	1086 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	TGDS	O95455	350 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	IL1B	P01584	269 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	LGALS2	P05162	132 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	NEFH	P12036	1026 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	ADRA1D	P25100	572 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	ELF1	P32519	619 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	BCAR1	P56945	870 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	6e-8	■□□□□ 10.1
PKM-222	ENST00000568883	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.2	□□□□□ -0.3
PKM-222	ENST00000568883	DPH6	Q7L8W6	267 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	NLRP9	Q7RTR0	991 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	ZC3H18	Q86VM9	953 aa	Known RBP	13.2	□□□□□ -0.3
PKM-222	ENST00000568883	SLC26A11	Q86WA9	606 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	LINC01465	Q8N7H1	131 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	UBA3	Q8TBC4	463 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	AGAP11	Q8TF27	550 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	SPOCK2	Q92563	424 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.2	□□□□□ -0.3
PKM-222	ENST00000568883	PEBP4	Q96S96	227 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	C10orf88	Q9H8K7	445 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	PLEKHA5	Q9HAU0	1116 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	GBA2	Q9HCG7	927 aa	Predicted RBP	13.2	□□□□□ -0.3
PKM-222	ENST00000568883	RAB6B	Q9NRW1	208 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	RBPJL	Q9UBG7	517 aa		13.2	□□□□□ -0.3
PKM-222	ENST00000568883	TCRBV7S3A2	A0A539	114 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	TCRBV9S1A1T	A0A576	114 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	KBTBD13	C9JR72	458 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	TRAFD1	O14545	582 aa	Predicted RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883	FAM155B	O75949	473 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	IQCF3	P0C7M6	154 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	ARF4	P18085	180 aa	Predicted RBP	13.19	□□□□□ -0.3
PKM-222	ENST00000568883	GRM5	P41594	1212 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	MAGEA6	P43360	314 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	PSMC4	P43686	418 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	GAD2	Q05329	585 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	SLC18A2	Q05940	514 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	TAF5	Q15542	800 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	GOLGA7B	Q2TAP0	167 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	ZNF410	Q86VK4	478 aa		13.19	□□□□□ -0.3
PKM-222	ENST00000568883	STK32A	Q8WU08	396 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms