RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	RAB6C	Q9H0N0	254 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	SYNC	Q9H7C4	482 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	TLE6	Q9H808	572 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	MANSC1	Q9H8J5	431 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	RSAD1	Q9HA92	442 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	2e-6	■■■■■ 55.4
SCAPER-215	ENST00000565507	TEX264	Q9Y6I9	313 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	C1QA	P02745	245 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	GNAZ	P19086	355 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	EPHB2	P29323	1055 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	STIP1	P31948	543 aa	Known RBP	13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	OVGP1	Q12889	678 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	CBLB	Q13191	982 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	KCNJ11	Q14654	390 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	CRYM	Q14894	314 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	ANKRD20A2	Q5SQ80	823 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	LDLRAD1	Q5T700	205 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	ANKRD20A1	Q5TYW2	823 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	ANKRD20A3	Q5VUR7	823 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	KIRREL3	Q8IZU9	778 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	ZC3H15	Q8WU90	426 aa	Known RBP	13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	TRAPPC12	Q8WVT3	735 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	SLC44A1	Q8WWI5	657 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	FAXDC2	Q96IV6	333 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	LNPEP	Q9UIQ6	1025 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507	ZFP69B	Q9UJL9	534 aa		13.74	□□□□□ -0.21
SCAPER-215	ENST00000565507		A0A0G2JMZ2	1700 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	INO80B-WBP1	J3KQ70	363 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	GPR25	O00155	361 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	RNF8	O76064	485 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	PCK1	P35558	622 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	NEK3	P51956	506 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	SLC18A2	Q05940	514 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	MBTD1	Q05BQ5	628 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	KBTBD12	Q3ZCT8	623 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	FAM182A	Q5T1J6	154 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	FYB2	Q5VWT5	728 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	PLPPR4	Q7Z2D5	763 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	LONP2	Q86WA8	852 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	SLC10A4	Q96EP9	437 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	TMEM176A	Q96HP8	235 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	NLRP4	Q96MN2	994 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	INO80B	Q9C086	356 aa	Predicted RBP	13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	RNPEPL1	Q9HAU8	725 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	SAR1A	Q9NR31	198 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	TNFSF13B	Q9Y275	285 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	KBTBD13	C9JR72	458 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	IL18RAP	O95256	599 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	PTPN4	P29074	926 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	RASSF2	P50749	326 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	ZNF143	P52747	638 aa	Predicted RBP	13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	PTK7	Q13308	1070 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	LRRC6	Q86X45	466 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	PPP1R13L	Q8WUF5	828 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	RPF1	Q9H9Y2	349 aa	Known RBP	13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	KCNK13	Q9HB14	408 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	USP29	Q9HBJ7	922 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	ALG13	Q9NP73	1137 aa	Known RBP	13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	DCTN4	Q9UJW0	460 aa		13.73	□□□□□ -0.21
SCAPER-215	ENST00000565507	LACTBL1	A8MY62	500 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	ITGB3	P05106	788 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	TROVE2	P10155	538 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	CALB2	P22676	271 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	FAAP100	Q0VG06	881 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	SEPT7	Q16181	437 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	CELF3	Q5SZQ8	465 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	ZC3H18	Q86VM9	953 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	CHSY1	Q86X52	802 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	EXOC8	Q8IYI6	725 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	PIWIL1	Q96J94	861 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	MIPEP	Q99797	713 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	ASNSD1	Q9NWL6	643 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	CNTN3	Q9P232	1028 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	LRRC37A2	A6NM11	1700 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	LAMA2	P24043	3122 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	C2CD4B	A6NLJ0	364 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507		M0QYV0	167 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	LPXN	O60711	386 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	AVIL	O75366	819 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	MT-ND3	P03897	115 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	HMGCR	P04035	888 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	TPBGL	P0DKB5	382 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	ROR1	Q01973	937 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	SYCP2L	Q5T4T6	812 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	DARS2	Q6PI48	645 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	BZW1	Q7L1Q6	419 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	DHX37	Q8IY37	1157 aa	Known RBP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	VRTN	Q9H8Y1	702 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	RRAGC	Q9HB90	399 aa		13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SCAPER-215	ENST00000565507	IQANK1	A0A1B0GTG1	560 aa		13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	BTBD19	C9JJ37	291 aa		13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	CYP3A5	P20815	502 aa		13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	IL4R	P24394	825 aa		13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	CDH6	P55285	790 aa		13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	ZNF200	P98182	395 aa	Predicted RBP	13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	PRKD1	Q15139	912 aa	Predicted RBP	13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	JADE1	Q6IE81	842 aa		13.71	□□□□□ -0.21
SCAPER-215	ENST00000565507	PRPF39	Q86UA1	669 aa	Known RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms