RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-206	ENST00000564934	TRIM24	O15164	1050 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	FAM189A1	O60320	539 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	ADRB2	P07550	413 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	KRT10	P13645	584 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	ACAT1	P24752	427 aa	Known RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	CSNK1E	P49674	416 aa	Known RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	SLC7A9	P82251	487 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	GAD2	Q05329	585 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	PDIA5	Q14554	519 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	RTP5	Q14D33	572 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	SF3A1	Q15459	793 aa	Known RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	CCDC142	Q17RM4	750 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	SDE2	Q6IQ49	451 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	PRICKLE2	Q7Z3G6	844 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	TMEM176A	Q96HP8	235 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	CCSER1	Q9C0I3	900 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	RNF38	Q9H0F5	515 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	DDX19A	Q9NUU7	478 aa	Known RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	WSB2	Q9NYS7	404 aa	Predicted RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	DEC1	Q9P2X7	70 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	FTSJ1	Q9UET6	329 aa		13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	EIF2B4	Q9UI10	523 aa	Known RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	SPTAN1	Q13813	2472 aa	Known RBP	13.93	□□□□□ -0.18
RPAP1-206	ENST00000564934	TCHH	Q07283	1943 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	BRINP1	O60477	761 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	PFKL	P17858	780 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	KYAT1	Q16773	422 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	KIF19	Q2TAC6	998 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	INTS6L	Q5JSJ4	861 aa	Known RBP	13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	COLEC12	Q5KU26	742 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	BTBD8	Q5XKL5	378 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	NUDT18	Q6ZVK8	323 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	RUFY3	Q7L099	469 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	CADM4	Q8NFZ8	388 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	GABRG3	Q99928	467 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	NTPCR	Q9BSD7	190 aa	Known RBP	13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	C17orf75	Q9HAS0	396 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	TRPM5	Q9NZQ8	1165 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	GTF3C4	Q9UKN8	822 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	SNX11	Q9Y5W9	270 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	SLCO1B1	Q9Y6L6	691 aa		13.92	□□□□□ -0.18
RPAP1-206	ENST00000564934	TEP1	Q99973	2627 aa	Known RBP	13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	KPNA7	A9QM74	516 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934		E9PMD0	336 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	OGT	O15294	1046 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	PCDHGA12	O60330	932 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	OLFM2	O95897	454 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	OR52Z1	P0C646	297 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	USP46	P62068	366 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	PKDCC	Q504Y2	493 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	BMP2KL	Q5H9B9	411 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	ARHGAP40	Q5TG30	622 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	USP49	Q70CQ1	688 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	ERICH1	Q86X53	443 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	CD302	Q8IX05	232 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	PDCL2	Q8N4E4	241 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	SPIRE2	Q8WWL2	714 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	LGMN	Q99538	433 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	PKMYT1	Q99640	499 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	ACBD6	Q9BR61	282 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	TRIM4	Q9C037	500 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	CPNE5	Q9HCH3	593 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	USP36	Q9P275	1121 aa	Known RBP	13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	TBC1D14	Q9P2M4	693 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	NXF1	Q9UBU9	619 aa	Known RBP	13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	STARD13	Q9Y3M8	1113 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	PCDHGA1	Q9Y5H4	931 aa		13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	UBR5	O95071	2799 aa	Predicted RBP	13.91	□□□□□ -0.18
RPAP1-206	ENST00000564934	NOTCH2	Q04721	2471 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	ZNF840P	A6NDX5	716 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	METTL12	A8MUP2	240 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	KCNK3	O14649	394 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	TRIM66	O15016	1216 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	HOXC11	O43248	304 aa	Predicted RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	PLS3	P13797	630 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	LIG4	P49917	911 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	CCT8	P50990	548 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	AFF3	P51826	1226 aa	Known RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	SMTN	P53814	917 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	TMPRSS3	P57727	454 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	IL9R	Q01113	521 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	RAD51AP2	Q09MP3	1159 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	ANO4	Q32M45	955 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	CFAP221	Q4G0U5	840 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	HES3	Q5TGS1	186 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	RINT1	Q6NUQ1	792 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	C1orf186	Q6ZWK4	172 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	DIS3L2	Q8IYB7	885 aa	Known RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	C1orf216	Q8TAB5	229 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	WASF1	Q92558	559 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	NAF1	Q96HR8	494 aa	Known RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	ZFR	Q96KR1	1074 aa	Known RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	DDX43	Q9NXZ2	648 aa	Known RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	DPP3	Q9NY33	737 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	ORC3	Q9UBD5	711 aa	Predicted RBP	13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	IL17B	Q9UHF5	180 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	DERA	Q9Y315	318 aa		13.9	□□□□□ -0.18
RPAP1-206	ENST00000564934	PCDHB6	Q9Y5E3	794 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms