RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ZNF638Q14966 1978 aaKnown RBP16.83■□□□□ 0.28
RAB40C-208ENST00000564703 MEA1Q16626 185 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 SLC47A2Q86VL8 602 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 UBALD2Q8IYN6 164 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 CELF5Q8N6W0 485 aaKnown RBP16.83■□□□□ 0.28
RAB40C-208ENST00000564703 ARL14EPQ8N8R7 260 aaPredicted RBP16.83■□□□□ 0.28
RAB40C-208ENST00000564703 KCTD13Q8WZ19 329 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 NOX5Q96PH1 765 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 CYP2S1Q96SQ9 504 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 KXD1Q9BQD3 176 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 ZSWIM1Q9BR11 485 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 NUP58Q9BVL2 599 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 TRPV4Q9HBA0 871 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 ACP6Q9NPH0 428 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 ST7Q9NRC1 585 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 TDP1Q9NUW8 608 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 THG1LQ9NWX6 298 aaKnown RBP16.83■□□□□ 0.28
RAB40C-208ENST00000564703 GMIPQ9P107 970 aa16.83■□□□□ 0.28
RAB40C-208ENST00000564703 NCANO14594 1321 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 FAM92AA1XBS5 289 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 C2orf78A6NCI8 922 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 NRG2O14511 850 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-208ENST00000564703 ZBED1O96006 694 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 RALAP11233 206 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 LCP1P13796 627 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 CYP11B1P15538 503 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 VIPR2P41587 438 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 GPD2P43304 727 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 RGS7P49802 495 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 PKDCCQ504Y2 493 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 RAB41Q5JT25 222 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 GPRIN1Q7Z2K8 1008 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 TADA2BQ86TJ2 420 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 STK32AQ8WU08 396 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 TRMT61BQ9BVS5 477 aaKnown RBP16.82■□□□□ 0.28
RAB40C-208ENST00000564703 OBP2AQ9NY56 170 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 NAGPAQ9UK23 515 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 USP3Q9Y6I4 520 aa16.82■□□□□ 0.28
RAB40C-208ENST00000564703 XIRP2A4UGR9 3374 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 HEPACAM2A8MVW5 462 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 TULP2O00295 520 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 EPHB6O15197 1021 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 PSMC3P17980 439 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 ARID5AQ03989 594 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 SNX30Q5VWJ9 437 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 PMF1Q6P1K2 205 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 CC2D1AQ6P1N0 951 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-208ENST00000564703 DENND1BQ6P3S1 775 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 CCDC186Q7Z3E2 898 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 MFSD6LQ8IWD5 586 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 TMEM35BQ8NCS4 154 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 TTC16Q8NEE8 873 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 ZNF397Q8NF99 534 aaPredicted RBP16.81■□□□□ 0.28
RAB40C-208ENST00000564703 DEPDC1BQ8WUY9 529 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 GOLGA1Q92805 767 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 RPP25Q9BUL9 199 aaKnown RBP16.81■□□□□ 0.28
RAB40C-208ENST00000564703 EDEM3Q9BZQ6 932 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 LHX5Q9H2C1 402 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 KIF9Q9HAQ2 790 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 CNGB3Q9NQW8 809 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 PCDHGC3Q9UN70 934 aa16.81■□□□□ 0.28
RAB40C-208ENST00000564703 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 TADA3O75528 432 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 FBXO21O94952 628 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 ZDHHC11BP0C7U3 371 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 MBL2P11226 248 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-208ENST00000564703 ATP5C1P36542 298 aaKnown RBP16.8■□□□□ 0.28
RAB40C-208ENST00000564703 TUBP50607 506 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 JAM2P57087 298 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 ZXDAP98168 799 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 ADIGQ0VDE8 80 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 TAF3Q5VWG9 929 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 BTBD8Q5XKL5 378 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 PM20D1Q6GTS8 502 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 POTEHQ6S545 545 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 ZNF677Q86XU0 584 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 BPIFB1Q8TDL5 484 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 EDAQ92838 391 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 IQCDQ96DY2 449 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 CDK5RAP1Q96SZ6 601 aaKnown RBP16.8■□□□□ 0.28
RAB40C-208ENST00000564703 ULBP1Q9BZM6 244 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 XPO4Q9C0E2 1151 aaKnown RBP16.8■□□□□ 0.28
RAB40C-208ENST00000564703 SMG9Q9H0W8 520 aaKnown RBP16.8■□□□□ 0.28
RAB40C-208ENST00000564703 BRD9Q9H8M2 597 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 MYO6Q9UM54 1294 aa16.8■□□□□ 0.28
RAB40C-208ENST00000564703 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB40C-208ENST00000564703 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 PI4K2BG5E9Z4 385 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 ZNF263O14978 683 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 SRFP11831 508 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 RARGP13631 454 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 FERP16591 822 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 YWHAGP61981 247 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB40C-208ENST00000564703 GPC5P78333 572 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 PFKPQ01813 784 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 ZNF268Q14587 947 aaPredicted RBP16.79■□□□□ 0.28
RAB40C-208ENST00000564703 RSRC2Q7L4I2 434 aaKnown RBP16.79■□□□□ 0.28
RAB40C-208ENST00000564703 PASD1Q8IV76 773 aa16.79■□□□□ 0.28
RAB40C-208ENST00000564703 IRF7Q92985 503 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms