RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 ISM2Q6H9L7 571 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 CLEC20AQ6ZU45 233 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 SH3RF2Q8TEC5 729 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 OSCP1Q8WVF1 389 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 CYP2S1Q96SQ9 504 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 ARID3AQ99856 593 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 MED10Q9BTT4 135 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 FAM49BQ9NUQ9 324 aa11.9□□□□□ -0.5
BMP4-204ENST00000558961 NDRG2Q9UN36 371 aaKnown RBP11.9□□□□□ -0.5
BMP4-204ENST00000558961 VPS13AQ96RL7 3174 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 LAMTOR5O43504 91 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 FAM200BP0CF97 657 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 TDGF1P13385 188 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 CD58P19256 250 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 FMO5P49326 533 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 ZNF165P49910 485 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 MTAPQ13126 283 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 PAK1Q13153 545 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 LRRC32Q14392 662 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 EML3Q32P44 896 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 TMEM196Q5HYL7 178 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 TRIM68Q6AZZ1 485 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 DHX40Q8IX18 779 aaKnown RBP11.89□□□□□ -0.51
BMP4-204ENST00000558961 UBR7Q8N806 425 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 MLKLQ8NB16 471 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 SCAMP5Q8TAC9 235 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 NELFBQ8WX92 580 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 ATP2A3Q93084 1043 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 FBXO32Q969P5 355 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 CYFIP2Q96F07 1278 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
BMP4-204ENST00000558961 RNF38Q9H0F5 515 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 EBF3Q9H4W6 596 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
BMP4-204ENST00000558961 CISHQ9NSE2 258 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
BMP4-204ENST00000558961 MYO15AQ9UKN7 3530 aa11.89□□□□□ -0.51
BMP4-204ENST00000558961 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 BIN1O00499 593 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
BMP4-204ENST00000558961 P4HA2O15460 535 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 PAPSS2O95340 614 aaPredicted RBP11.88□□□□□ -0.51
BMP4-204ENST00000558961 ARSAP15289 507 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 RAD23BP54727 409 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 MAP3K7CLP57077 242 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 CUL2Q13617 745 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 GAS6Q14393 721 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 NCAPHQ15003 741 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
BMP4-204ENST00000558961 ARHGAP17Q68EM7 881 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 KLHL10Q6JEL2 608 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
BMP4-204ENST00000558961 ZC3H14Q6PJT7 736 aaKnown RBP11.88□□□□□ -0.51
BMP4-204ENST00000558961 ASCL5Q7RTU5 278 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 DDX42Q86XP3 938 aaKnown RBP eCLIP11.88□□□□□ -0.51
BMP4-204ENST00000558961 SYNPOQ8N3V7 929 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 CPA6Q8N4T0 437 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 SLC4A11Q8NBS3 891 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 ZBTB44Q8NCP5 570 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 TMEM176AQ96HP8 235 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 MED15Q96RN5 788 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 FBXO44Q9H4M3 255 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 ECT2Q9H8V3 914 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 LMAN1LQ9HAT1 526 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 CTNND2Q9UQB3 1225 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 WNT6Q9Y6F9 365 aa11.88□□□□□ -0.51
BMP4-204ENST00000558961 LEFTY2O00292 366 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 COCHO43405 550 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 GFRA3O60609 400 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 GNA14O95837 355 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 TBXAS1P24557 533 aaPredicted RBP11.87□□□□□ -0.51
BMP4-204ENST00000558961 ERCC5P28715 1186 aaPredicted RBP11.87□□□□□ -0.51
BMP4-204ENST00000558961 ADORA2BP29275 332 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 GJA4P35212 333 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
BMP4-204ENST00000558961 PON2Q15165 354 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 TATDN2Q93075 761 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
BMP4-204ENST00000558961 PDLIM2Q96JY6 352 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 DUSP16Q9BY84 665 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 FAM126AQ9BYI3 521 aaPredicted RBP11.87□□□□□ -0.51
BMP4-204ENST00000558961 HSD3B7Q9H2F3 369 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 DUS2Q9NX74 493 aaKnown RBP11.87□□□□□ -0.51
BMP4-204ENST00000558961 GMIPQ9P107 970 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 SCML2Q9UQR0 700 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 PCDHGA2Q9Y5H1 932 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 CPQQ9Y646 472 aa11.87□□□□□ -0.51
BMP4-204ENST00000558961 AP5Z1O43299 807 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 LILRB5O75023 590 aa11.86□□□□□ -0.51
BMP4-204ENST00000558961 NFATC1O95644 943 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms