RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 MRPL45Q9BRJ2 306 aaKnown RBP8.59□□□□□ -1.03
TRAF3-205ENST00000558700 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 EBF3Q9H4W6 596 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 CRTAC1Q9NQ79 661 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 GKN1Q9NS71 199 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 USP25Q9UHP3 1055 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 USP18Q9UMW8 372 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 GPR179Q6PRD1 2367 aa8.59□□□□□ -1.03
TRAF3-205ENST00000558700 CEP250Q9BV73 2442 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 C2orf78A6NCI8 922 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 CHURC1-FNTBB4DL54 471 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 F8VP50 259 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 K7ESF4 209 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 TRDMT1O14717 391 aaKnown RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 LRP3O75074 770 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ATG13O75143 517 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 KIF20AO95235 890 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 NFATC1O95644 943 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 PDGFRBP09619 1106 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ARSAP15289 507 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 PFKFB1P16118 471 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 TRIM21P19474 475 aaKnown RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 DRD1P21728 446 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 BDNFP23560 247 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 LMO2P25791 158 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 MAPK1P28482 360 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 HOXA6P31267 233 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 SCNN1AP37088 669 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 PPP3CCP48454 512 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 FNTBP49356 437 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 MYL6P60660 151 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 NOP14P78316 857 aaKnown RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 KRT85P78386 507 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 PKP1Q13835 747 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 OCLNQ16625 522 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 FBXO43Q4G163 708 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ZNF667Q5HYK9 610 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 WDR44Q5JSH3 913 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 HEATR6Q6AI08 1181 aaKnown RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 CEP68Q76N32 757 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 DGLUCYQ7Z3D6 616 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 GRAMD1CQ8IYS0 662 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ARL14EPQ8N8R7 260 aaPredicted RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 KIAA0895Q8NCT3 520 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 TTC16Q8NEE8 873 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 PDZD8Q8NEN9 1154 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 RIN3Q8TB24 985 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 SH3RF2Q8TEC5 729 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 BAP1Q92560 729 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC47Q96A33 483 aaKnown RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ACDQ96AP0 544 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 C8orf48Q96LL4 319 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 SLITRK1Q96PX8 696 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 TTLL2Q9BWV7 592 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 DUS2Q9NX74 493 aaKnown RBP8.58□□□□□ -1.04
TRAF3-205ENST00000558700 TRPM5Q9NZQ8 1165 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 ARHGAP26Q9UNA1 814 aa8.58□□□□□ -1.04
TRAF3-205ENST00000558700 DMXL1Q9Y485 3027 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 LRRIQ3A6PVS8 624 aaPredicted RBP8.57□□□□□ -1.04
TRAF3-205ENST00000558700 A8MXQ7 604 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 PRR5-ARHGAP8B1AHC4 643 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 KLRC4O43908 158 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 DKK1O94907 266 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 RETP07949 1114 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 P4HA1P13674 534 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 HDCP19113 662 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 GNL1P36915 607 aaPredicted RBP8.57□□□□□ -1.04
TRAF3-205ENST00000558700 ARHGAP8P85298 464 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 PSMD2Q13200 908 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 SIM2Q14190 667 aaPredicted RBP8.57□□□□□ -1.04
TRAF3-205ENST00000558700 LPAL2Q16609 132 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 TDRD10Q5VZ19 366 aaKnown RBP8.57□□□□□ -1.04
TRAF3-205ENST00000558700 FSTL4Q6MZW2 842 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 SCARA5Q6ZMJ2 495 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 WDR5BQ86VZ2 330 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 DDX42Q86XP3 938 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRAF3-205ENST00000558700 SLC9A9Q8IVB4 645 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 KIAA1958Q8N8K9 716 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 ZNF511Q8NB15 262 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 B3GALNT2Q8NCR0 500 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 CCDC26Q8TAB7 109 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 CD101Q93033 1021 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 TNIP3Q96KP6 325 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 P2RY13Q9BPV8 354 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 ZNF518BQ9C0D4 1074 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 XYLT2Q9H1B5 865 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 SMYD3Q9H7B4 428 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 DLL3Q9NYJ7 618 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 GCNT4Q9P109 453 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
TRAF3-205ENST00000558700 SLC8A2Q9UPR5 921 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
TRAF3-205ENST00000558700 ATP6V1DQ9Y5K8 247 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms