RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 PIGSQ96S52 555 aa6.9□□□□□ -1.3
CLPX-202ENST00000558103 RBM15Q96T37 977 aaKnown RBP eCLIP6.9□□□□□ -1.3
CLPX-202ENST00000558103 ZDHHC5Q9C0B5 715 aa6.9□□□□□ -1.3
CLPX-202ENST00000558103 RNPEPQ9H4A4 650 aa6.9□□□□□ -1.3
CLPX-202ENST00000558103 CTNNA3Q9UI47 895 aa6.9□□□□□ -1.3
CLPX-202ENST00000558103 MUC6Q6W4X9 2439 aa6.9□□□□□ -1.31
CLPX-202ENST00000558103 MYH9P35579 1960 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 DMDP11532 3685 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 H3BNC9 293 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 GCOM1H8Y6P7 765 aaPredicted RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 LAMTOR5O43504 91 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 STAM2O75886 525 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 POLR2MP0CAP2 368 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 GSPT1P15170 499 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 SLC9A1P19634 815 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 USP10Q14694 798 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 SKOR2Q2VWA4 1001 aaPredicted RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 METTL7BQ6UX53 244 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 ARHGEF18Q6ZSZ5 1173 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 RALYLQ86SE5 291 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 NXPE1Q8N323 547 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 APBB2Q92870 758 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 E2F7Q96AV8 911 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 PABPC5Q96DU9 382 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 GPR20Q99678 358 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 TARS2Q9BW92 718 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 RWDD1Q9H446 243 aaPredicted RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 PCIF1Q9H4Z3 704 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 MLXIPQ9HAP2 919 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 OXSMQ9NWU1 459 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 CNOT11Q9UKZ1 510 aaKnown RBP6.89□□□□□ -1.31
CLPX-202ENST00000558103 SPO11Q9Y5K1 396 aa6.89□□□□□ -1.31
CLPX-202ENST00000558103 ADGRA3Q8IWK6 1321 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 C5orf67F2Z3F1 127 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 FIBPO43427 364 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 ADCY8P40145 1251 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 GYS2P54840 703 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 ALDH6A1Q02252 535 aaKnown RBP6.88□□□□□ -1.31
CLPX-202ENST00000558103 MGAT3Q09327 533 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 TRAF1Q13077 416 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 GPM6BQ13491 265 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 NEDD9Q14511 834 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 PTPROQ16827 1216 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 CREB3L3Q68CJ9 461 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 RPAINQ86UA6 219 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 PPM1KQ8N3J5 372 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 LMBR1Q8WVP7 490 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 SEPT8Q92599 483 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 YME1L1Q96TA2 773 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 ELF4Q99607 663 aaPredicted RBP6.88□□□□□ -1.31
CLPX-202ENST00000558103 FOXB1Q99853 325 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 SENP7Q9BQF6 1050 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 IFIH1Q9BYX4 1025 aaKnown RBP6.88□□□□□ -1.31
CLPX-202ENST00000558103 SETD4Q9NVD3 440 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 PPP4R1LQ9P1A2 415 aa6.88□□□□□ -1.31
CLPX-202ENST00000558103 NRCAMQ92823 1304 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 TECTAO75443 2155 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 A0A0G2JNJ9 132 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 H3BQ06 376 aaPredicted RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 MEIS2O14770 477 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 IFIT3O14879 490 aaKnown RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 GAS7O60861 476 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 CHRNA1P02708 482 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 ZNF888P0CJ79 500 aaPredicted RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 APEX1P27695 318 aaKnown RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 ETV4P43268 484 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 SCNN1BP51168 640 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 ANTXR2P58335 489 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 DSG1Q02413 1049 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 PTH1RQ03431 593 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 TRDNQ13061 729 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 EPHA7Q15375 998 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 TCEAL5Q5H9L2 206 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 TTC22Q5TAA0 569 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 USP17L6PQ6QN14 398 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 GGNQ86UU5 652 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 MB21D2Q8IYB1 491 aaPredicted RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 SCYL1Q96KG9 808 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 SSBP3Q9BWW4 388 aaPredicted RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 SPZ1Q9BXG8 430 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 Q9UFV3 132 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 CDC42EP3Q9UKI2 254 aa6.87□□□□□ -1.31
CLPX-202ENST00000558103 ZNF215Q9UL58 517 aaPredicted RBP6.87□□□□□ -1.31
CLPX-202ENST00000558103 VPS13AQ96RL7 3174 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 CFAP54Q96N23 3096 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 A0A087X0B3 334 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 ERICH2A1L162 156 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 NPEPPSL1A6NEC2 478 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 E7EWF7 191 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 ATP9AO75110 1047 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 MAFO75444 373 aaPredicted RBP6.86□□□□□ -1.31
CLPX-202ENST00000558103 RB1P06400 928 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 GHRP10912 638 aa6.86□□□□□ -1.31
CLPX-202ENST00000558103 MYCLP1P12525 358 aaPredicted RBP6.86□□□□□ -1.31
CLPX-202ENST00000558103 ALADP13716 330 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms