RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ABCG1P45844 678 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 HOXA4Q00056 320 aaPredicted RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 EZH2Q15910 746 aaKnown RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 SRSF7Q16629 238 aaKnown RBP eCLIP4.07□□□□□ -1.76
SPG11-206ENST00000558093 KIAA1614Q5VZ46 1190 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 RNF44Q7L0R7 432 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 SDR16C5Q8N3Y7 309 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 CCDC33Q8N5R6 958 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 TERB1Q8NA31 727 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 NGDNQ8NEJ9 315 aaKnown RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 SEMA6DQ8NFY4 1073 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 RSPRY1Q96DX4 576 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 IQCDQ96DY2 449 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 ZBTB45Q96K62 511 aaPredicted RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 MSLNLQ96KJ4 702 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 SNX22Q96L94 193 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 LENG8Q96PV6 779 aaPredicted RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 STRBPQ96SI9 672 aaKnown RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 MMS19Q96T76 1030 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 BRIP1Q9BX63 1249 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 TRIM5Q9C035 493 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 UNKQ9C0B0 810 aaKnown RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 FAM83DQ9H4H8 585 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 H7C1Q1 480 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 THAP12O43422 761 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 PMPCBO75439 489 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 GCATO75600 419 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 USP1O94782 785 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 MT-ND5P03915 603 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 ANXA2P07355 339 aaKnown RBP4.06□□□□□ -1.76
SPG11-206ENST00000558093 PARP1P09874 1014 aaKnown RBP4.06□□□□□ -1.76
SPG11-206ENST00000558093 MYCLP12524 364 aaPredicted RBP4.06□□□□□ -1.76
SPG11-206ENST00000558093 CREB1P16220 341 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 YY1P25490 414 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 GATMP50440 423 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 TUBA4AP68366 448 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 KCNAB1Q14722 419 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 PROSER3Q2NL68 480 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 ZNF750Q32MQ0 723 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 COLEC12Q5KU26 742 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 MZT2AQ6P582 158 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 ZNF782Q6ZMW2 699 aaPredicted RBP4.06□□□□□ -1.76
SPG11-206ENST00000558093 PTCHD4Q6ZW05 846 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 LIX1LQ8IVB5 337 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 KRT78Q8N1N4 520 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 C8orf48Q96LL4 319 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 HIST1H2AAQ96QV6 131 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 SNX18Q96RF0 628 aa4.06□□□□□ -1.76
SPG11-206ENST00000558093 HEYLQ9NQ87 328 aaPredicted RBP4.06□□□□□ -1.76
SPG11-206ENST00000558093 POM121BA6NF01 834 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 F8W8V4 182 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 EXOC5O00471 708 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 KIF3BO15066 747 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 KPNA5O15131 536 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 IL18RAPO95256 599 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 CYP2D6P10635 497 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 CD19P15391 556 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 PHKG2P15735 406 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 CERS1P27544 350 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 RENBPP51606 427 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 ALDH5A1P51649 535 aaPredicted RBP4.05□□□□□ -1.76
SPG11-206ENST00000558093 TIRAPP58753 221 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 TIAL1Q01085 375 aaKnown RBP eCLIP4.05□□□□□ -1.76
SPG11-206ENST00000558093 TFF2Q03403 129 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 IFIT5Q13325 482 aaKnown RBP4.05□□□□□ -1.76
SPG11-206ENST00000558093 DAG1Q14118 895 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 NPY5RQ15761 445 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 COBLL1Q53SF7 1204 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 HSP90AB2PQ58FF8 381 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 PLAG1Q6DJT9 500 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 FCRL6Q6DN72 434 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 SFTPA1Q8IWL2 248 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 SRRM1Q8IYB3 904 aaKnown RBP4.05□□□□□ -1.76
SPG11-206ENST00000558093 VGLL2Q8N8G2 317 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 DPF1Q92782 380 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 PHKBQ93100 1093 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 HS6ST2Q96MM7 605 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 ASB2Q96Q27 587 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 KRTAP9-8Q9BYQ0 159 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 NRIP3Q9NQ35 241 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 DDX21Q9NR30 783 aaKnown RBP eCLIP4.05□□□□□ -1.76
SPG11-206ENST00000558093 FLRT1Q9NZU1 646 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 DNAJB11Q9UBS4 358 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 LPAR3Q9UBY5 353 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 HPSEQ9Y251 543 aa4.05□□□□□ -1.76
SPG11-206ENST00000558093 WIPF3A6NGB9 483 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 TISP43B9A030 160 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 POC1B-GALNT4F8VUJ3 575 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 M0R3H8 397 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 FGAP02671 866 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 NHLRC4P0CG21 123 aaPredicted RBP4.04□□□□□ -1.76
SPG11-206ENST00000558093 BTF3P20290 206 aaKnown RBP4.04□□□□□ -1.76
SPG11-206ENST00000558093 LMO1P25800 156 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 RBL1P28749 1068 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 EPHB2P29323 1055 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 MPGP29372 298 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 NTSR1P30989 418 aa4.04□□□□□ -1.76
SPG11-206ENST00000558093 COPB1P53618 953 aaKnown RBP4.04□□□□□ -1.76
SPG11-206ENST00000558093 PSG6Q00889 435 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms