RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 K7ERI5 159 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PAPSS1O43252 624 aaPredicted RBP10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 NOL4O94818 638 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 MT-CO3P00414 261 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CXCL8P10145 99 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CTSKP43235 329 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TPMTP51580 245 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 LILRA4P59901 499 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 EXOSC10Q01780 885 aaKnown RBP10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SHBQ15464 509 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TEAD4Q15561 434 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 FUT11Q495W5 492 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CREB3L3Q68CJ9 461 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SDE2Q6IQ49 451 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 FAM124AQ86V42 546 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 BLIDQ8IZY5 108 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 RFFLQ8WZ73 363 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TRMT2BQ96GJ1 504 aaKnown RBP10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 SLC26A6Q9BXS9 759 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 EPN3Q9H201 632 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ITM2CQ9NQX7 267 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CFAP97Q9P2B7 532 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 DEC1Q9P2X7 70 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 UXTQ9UBK9 157 aaPredicted RBP10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PCDHB5Q9Y5E4 795 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TCHHQ07283 1943 aa10.35□□□□□ -0.75
IGKV2D-28-202ENST00000558026 PRRT4C9JH25 899 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 LAD1O00515 517 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 EFSO43281 561 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CCNT1O60563 726 aaKnown RBP10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 DXOO77932 396 aaKnown RBP10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ITGAVP06756 1048 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 MCF2P10911 925 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CYP2F1P24903 491 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 GRIA4P48058 902 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 EFNA5P52803 228 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ERVPABLB-1P60509 514 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 FOXK1P85037 733 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ZBTB6Q15916 424 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CCDC142Q17RM4 750 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ZSCAN23Q3MJ62 389 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 ARL13BQ3SXY8 428 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CACTIN-AS1Q8N1I8 211 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 C2orf15Q8WU43 125 aaKnown RBP10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 MYRFLQ96LU7 910 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 DRC1Q96MC2 740 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 RNF38Q9H0F5 515 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 C6orf106Q9H6K1 298 aaPredicted RBP10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 STARD13Q9Y3M8 1113 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 CPQQ9Y646 472 aa10.34□□□□□ -0.75
IGKV2D-28-202ENST00000558026 F8P00451 2351 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CELSR2Q9HCU4 2923 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SLC9A3R1O14745 358 aaPredicted RBP10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 USP12O75317 370 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CYP11A1P05108 521 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PROZP22891 400 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ELAVL4P26378 380 aaKnown RBP10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 FOSBP53539 338 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 GAD2Q05329 585 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PPP2R5AQ15172 486 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 NTRK3Q16288 839 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 MPZL3Q6UWV2 235 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PTRH1Q86Y79 214 aaKnown RBP10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 RPF1Q9H9Y2 349 aaKnown RBP10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SH3GLB2Q9NR46 395 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ADAMTS1Q9UHI8 967 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 PLXNA2O75051 1894 aa10.33□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CRYBG3Q68DQ2 2970 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ZFC3H1O60293 1989 aaKnown RBP10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ITGB2P05107 769 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 CYP11B2P19099 503 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ABCB4P21439 1286 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 LSSP48449 732 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 NUCB1Q02818 461 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ANO4Q32M45 955 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 BTBD8Q5XKL5 378 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ZNF787Q6DD87 383 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 DHX32Q7L7V1 743 aaKnown RBP10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 ADAT2Q7Z6V5 191 aaKnown RBP10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 NEK8Q86SG6 692 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SMC5Q8IY18 1101 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 LSMEM2Q8N112 164 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 SAP25Q8TEE9 199 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 MMS19Q96T76 1030 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 NUP58Q9BVL2 599 aa10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 RNF26Q9BY78 433 aaPredicted RBP10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 MRPL4Q9BYD3 311 aaKnown RBP10.32□□□□□ -0.76
IGKV2D-28-202ENST00000558026 TRIM9Q9C026 710 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms