RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ATAD1Q8NBU5 361 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 MNS1Q8NEH6 495 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 NDRG1Q92597 394 aaKnown RBP15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 CARD9Q9H257 536 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 RNF14Q9UBS8 474 aa15.18■□□□□ 0.02
ARHGEF40-208ENST00000557498 PLXNA4Q9HCM2 1894 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 MYO16Q9Y6X6 1858 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 COL4A4P53420 1690 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 WDR27A2RRH5 827 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 TNFRSF10BO14763 440 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 ZBED1O96006 694 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 HAPLN1P10915 354 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 DESP17661 470 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 RPL17P18621 184 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 SDC4P31431 198 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 OR1D2P34982 312 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 SSR1P43307 286 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 MAGEA10P43363 369 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 PTPN9P43378 593 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 SLC5A3P53794 718 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 RWDD2BP57060 319 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 CCDC14Q49A88 953 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 CCDC181Q5TID7 509 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 LRRC38Q5VT99 294 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 ZNF572Q7Z3I7 529 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 GPR65Q8IYL9 337 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 VPS52Q8N1B4 723 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 TTC9BQ8N6N2 239 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 MYRIPQ8NFW9 859 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 IRGQQ8WZA9 623 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 FAM149B1Q96BN6 582 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 MS4A14Q96JA4 679 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 SLC2A13Q96QE2 648 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 CLSTN3Q9BQT9 956 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 DDX23Q9BUQ8 820 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 ZBP1Q9H171 429 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 USP3Q9Y6I4 520 aa15.17■□□□□ 0.02
ARHGEF40-208ENST00000557498 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 PDE2AO00408 941 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 CEP104O60308 925 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 LRCH4O75427 683 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 RNF8O76064 485 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 USP17L7P0C7H9 530 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 TCF4P15884 667 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 CTNNB1P35222 781 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 GPR15P49685 360 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 YWHAZP63104 245 aaKnown RBP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 CREMQ03060 361 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 MGAT5BQ3V5L5 792 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 C9orf50Q5SZB4 431 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 PM20D1Q6GTS8 502 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 HFE2Q6ZVN8 426 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 BHLHA9Q7RTU4 235 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 DEFB106AQ8N104 65 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 ARFGAP1Q8N6T3 406 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 LRRN4CLQ8ND94 238 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 ACTRT1Q8TDG2 376 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 CFAP57Q96MR6 1250 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 SEPT5Q99719 369 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 CRISPLD1Q9H336 500 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 MRPL17Q9NRX2 175 aaKnown RBP15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 SMARCAL1Q9NZC9 954 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 EHD2Q9NZN4 543 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 RWDD3Q9Y3V2 267 aa15.16■□□□□ 0.02
ARHGEF40-208ENST00000557498 CTAGE15A4D2H0 777 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 LINC01553A4QN01 128 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 YJEFN3A6XGL0 299 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 E7ENQ6 273 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 PGRMC1O00264 195 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 TADA3O75528 432 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 LTFP02788 710 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 CTAGE8P0CG41 777 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 CTSAP10619 480 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 DNAJB2P25686 324 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 PCK1P35558 622 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 GJC1P36383 396 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 BMPR1AP36894 532 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 MATKP42679 507 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 SLC25A11Q02978 314 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 DUSP4Q13115 394 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 ZNF211Q13398 564 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 DDR2Q16832 855 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 HADHQ16836 314 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 CDO1Q16878 200 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 SEL1L2Q5TEA6 688 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 SDHAF4Q5VUM1 108 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 POLNQ7Z5Q5 900 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 CTAGE6Q86UF2 777 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 CTAGE4Q8IX94 777 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 KATNAL2Q8IYT4 538 aa15.15■□□□□ 0.02
ARHGEF40-208ENST00000557498 NUP93Q8N1F7 819 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms