RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 CDH22Q9UJ99 828 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 SYNPO2Q9UMS6 1093 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 LZTS1Q9Y250 596 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 XIRP1Q702N8 1843 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 NRAPQ86VF7 1730 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 KBTBD13C9JR72 458 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 BPGMP07738 259 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 TCF4P15884 667 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 ACO1P21399 889 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 HSPA13P48723 471 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 YWHAGP61981 247 aaKnown RBP eCLIP8.09□□□□□ -1.11
CHD8-209ENST00000555935 OTUD4Q01804 1114 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 CREB5Q02930 508 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 STX3Q13277 289 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 TLR1Q15399 786 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 RABGAP1LQ5R372 815 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 POTEAQ6S8J7 498 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 HHIPL2Q6UWX4 724 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 KBTBD6Q86V97 674 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 GPD1LQ8N335 351 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 TMEM161BQ8NDZ6 487 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 CMTM5Q96DZ9 223 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 DNAJC1Q96KC8 554 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 MECRQ9BV79 373 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 PRR12Q9ULL5 1215 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 AGTPBP1Q9UPW5 1226 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 APOBEC2Q9Y235 224 aaKnown RBP8.09□□□□□ -1.11
CHD8-209ENST00000555935 POMPQ9Y244 141 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 TEX264Q9Y6I9 313 aa8.09□□□□□ -1.11
CHD8-209ENST00000555935 H3BNX3 289 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 TRDMT1O14717 391 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 HNRNPCP07910 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
CHD8-209ENST00000555935 CD48P09326 243 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 KITP10721 976 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 TAL1P17542 331 aaPredicted RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 PMLP29590 882 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 L1CAMP32004 1257 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 ALDH1A3P47895 512 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 QARSP47897 775 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 HIRAP54198 1017 aaPredicted RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 EPHB1P54762 984 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 EMP3P54852 163 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 GDF10P55107 478 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 RPL7AP62424 266 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 MRPS5P82675 430 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 ZNF252P-AS1Q0IIN9 211 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 RARS2Q5T160 578 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 DNAJC24Q6P3W2 148 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 CROCCP3Q8IVE0 287 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 FBXW8Q8N3Y1 598 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 KCNK16Q96T55 309 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 MXRA8Q9BRK3 442 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 XAB2Q9HCS7 855 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 PSMD13Q9UNM6 376 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 CNTN6Q9UQ52 1028 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 INPP5FQ9Y2H2 1132 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 SH3GLB1Q9Y371 365 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 hCG_2014768A0A024R1R8 64 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 A0A0B4J269 797 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 TCRBV7S3A2A0A539 114 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 C3orf70A6NLC5 250 aaPredicted RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 F8VP50 259 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 DNAJA2O60884 412 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 KRT38O76015 456 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 GARTP22102 1010 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 PRDX6P30041 224 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 CRHR1P34998 444 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 NR1H2P55055 460 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 CLDN10P78369 228 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 BASP1P80723 227 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 DMP1Q13316 513 aaPredicted RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 TUBB3Q13509 450 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 CUL2Q13617 745 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 APOFQ13790 326 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 CNGA3Q16281 694 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 TAZQ16635 292 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 MYLK3Q32MK0 819 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 ZACNQ401N2 412 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 RALGPS1Q5JS13 557 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 DCUN1D2Q6PH85 259 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 IGDCC3Q8IVU1 814 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 THNSL1Q8IYQ7 743 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 PQLC1Q8N2U9 271 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 METTL25Q8N6Q8 603 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 ZBTB8BQ8NAP8 495 aaPredicted RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 ZFP28Q8NHY6 868 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 PIWIL2Q8TC59 973 aaKnown RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 POMGNT1Q8WZA1 660 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 DCUN1D1Q96GG9 259 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 GCNAQ96QF7 691 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 EBF4Q9BQW3 602 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 PI4KBQ9UBF8 816 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 MARCOQ9UEW3 520 aaPredicted RBP8.08□□□□□ -1.12
CHD8-209ENST00000555935 PCDHB4Q9Y5E5 795 aa8.08□□□□□ -1.12
CHD8-209ENST00000555935 QSER1Q2KHR3 1735 aa8.07□□□□□ -1.12
CHD8-209ENST00000555935 CCDC195A0A1B0GUA6 201 aa8.07□□□□□ -1.12
CHD8-209ENST00000555935 TCRBV5S1A1TA0A578 114 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms