RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CCDC142Q17RM4 750 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ODF2Q5BJF6 829 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 RSPO2Q6UXX9 243 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-220ENST00000555634 FAM183BPQ6ZVS7 135 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 PAQR9Q6ZVX9 377 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 SND1Q7KZF4 910 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■□□□ 11.8
SHMT2-220ENST00000555634 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
SHMT2-220ENST00000555634 TMEM110Q86TL2 294 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 XYLT1Q86Y38 959 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 SCML4Q8N228 414 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 LEMD2Q8NC56 503 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 KREMEN2Q8NCW0 462 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 OVCA2Q8WZ82 227 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 CASP10Q92851 521 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 FBXO32Q969P5 355 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 MCEEQ96PE7 176 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 GAS2L1Q99501 681 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-220ENST00000555634 NACA2Q9H009 215 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 PRO3102Q9H379 93 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 MAN1C1Q9NR34 630 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 ASNSD1Q9NWL6 643 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 IP6K2Q9UHH9 426 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 MAGED2Q9UNF1 606 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-220ENST00000555634 SLC27A5Q9Y2P5 690 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 PAXBP1Q9Y5B6 917 aa11.76□□□□□ -0.53
SHMT2-220ENST00000555634 NUP210Q8TEM1 1887 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 ADAM12O43184 909 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 LILRB3O75022 631 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 DAB1O75553 588 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 RNF8O76064 485 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 HNRNPA1P09651 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 RALAP11233 206 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 DNAJB1P25685 340 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 HOXA9P31269 272 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 NRIP1P48552 1158 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 CDR1P51861 262 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 MRPS5P82675 430 aaKnown RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 DDR2Q16832 855 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 RAB41Q5JT25 222 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 BTBD8Q5XKL5 378 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 PLEKHA7Q6IQ23 1121 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 SLC26A9Q7LBE3 791 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 DAAM2Q86T65 1068 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 SLC35G2Q8TBE7 412 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 RNF139Q8WU17 664 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 UBE2Q2Q8WVN8 375 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 TRMT2BQ96GJ1 504 aaKnown RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 ZNF512Q96ME7 567 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 PACSIN1Q9BY11 444 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 ULBP1Q9BZM6 244 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 SFXN1Q9H9B4 322 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 POPDC2Q9HBU9 364 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 ASAH2Q9NR71 780 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 OLA1Q9NTK5 396 aaKnown RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 ZDHHC7Q9NXF8 308 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 RRN3Q9NYV6 651 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 CYTH4Q9UIA0 394 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 REXO2Q9Y3B8 237 aaKnown RBP11.75□□□□□ -0.53
SHMT2-220ENST00000555634 ANAPC1Q9H1A4 1944 aa11.75□□□□□ -0.53
SHMT2-220ENST00000555634 C2orf16Q68DN1 1984 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 SIGLEC16A6NMB1 481 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 SLC38A8A6NNN8 435 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 TULP2O00295 520 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 NCK2O43639 380 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 SPOPO43791 374 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 BEST1O76090 585 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 LTFP02788 710 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 USP17L7P0C7H9 530 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 GPD1P21695 349 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 RPL34P49207 117 aaKnown RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 CACNA2D1P54289 1103 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 HADHBP55084 474 aaKnown RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 DAOAP59103 153 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 RNASE9P60153 205 aaKnown RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 YWHAZP63104 245 aaKnown RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 MAMLD1Q13495 774 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 PIGHQ14442 188 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 DUSP6Q16828 381 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
SHMT2-220ENST00000555634 C11orf63Q6NUN7 778 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 OLFML1Q6UWY5 402 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 WDTC1Q8N5D0 677 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 TTC9BQ8N6N2 239 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 OLIG1Q8TAK6 271 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 PSMG2Q969U7 264 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 PIDD1Q9HB75 910 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 ABCC13Q9NSE7 274 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 TRPM5Q9NZQ8 1165 aa11.74□□□□□ -0.53
SHMT2-220ENST00000555634 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms