RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 MAGEA11P43364 429 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 ROR1Q01973 937 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 DSG1Q02413 1049 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 ZNF252P-AS1Q0IIN9 211 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 SMARCB1Q12824 385 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 TAF5Q15542 800 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 DDR2Q16832 855 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 WHAMMP3Q1A5X7 153 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 MGAT5BQ3V5L5 792 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 CFAP221Q4G0U5 840 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 RAB41Q5JT25 222 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 C9orf50Q5SZB4 431 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 CCDC181Q5TID7 509 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 DAB2IPQ5VWQ8 1189 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 VSTM1Q6UX27 236 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 SLC26A9Q7LBE3 791 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 GPRIN1Q7Z2K8 1008 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 KLHL23Q8NBE8 558 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 ATAD1Q8NBU5 361 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 MNS1Q8NEH6 495 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 AUTS2Q8WXX7 1259 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 GOLGA1Q92805 767 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 FAM149B1Q96BN6 582 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 PBKQ96KB5 322 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 CARD6Q9BX69 1037 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 L2HGDHQ9H9P8 463 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 CNGB3Q9NQW8 809 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 MRPL17Q9NRX2 175 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 ASNSD1Q9NWL6 643 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 STK39Q9UEW8 545 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 TMEM59LQ9UK28 342 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 SLC27A5Q9Y2P5 690 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 PLXNA4Q9HCM2 1894 aa10.13□□□□□ -0.79
HNRNPC-220ENST00000555585 WDR27A2RRH5 827 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 C2CD4BA6NLJ0 364 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 ADAM12O43184 909 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SART1O43290 800 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CEP104O60308 925 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 RNF8O76064 485 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SLU7O95391 586 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 ZBED1O96006 694 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 HAPLN1P10915 354 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 HOXB1P14653 301 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SDC4P31431 198 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 FLT3P36888 993 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 BMPR1AP36894 532 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 PAFAH1B1P43034 410 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 GPR15P49685 360 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 ZNF143P52747 638 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 RWDD2BP57060 319 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 DAOAP59103 153 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 TAS2R40P59535 323 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 RPL10AP62906 217 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CKAP4Q07065 602 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 ADCY1Q08828 1119 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SHHQ15465 462 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 HADHQ16836 314 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CDO1Q16878 200 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 ZFYVE27Q5T4F4 411 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SEL1L2Q5TEA6 688 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 RASIP1Q5U651 963 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SDHAF4Q5VUM1 108 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SLC8B1Q6J4K2 584 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 TMEM92Q6UXU6 159 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 RHOT1Q8IXI2 618 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CEP112Q8N8E3 955 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 NIPA2Q8N8Q9 360 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 FNIP1Q8TF40 1166 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 COG1Q8WTW3 980 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 KRT35Q92764 455 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 KHSRPQ92945 711 aaKnown RBP eCLIP10.12□□□□□ -0.794e-8■■□□□ 14.2
HNRNPC-220ENST00000555585 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CD101Q93033 1021 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 C8orf48Q96LL4 319 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SEPT5Q99719 369 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CLSTN3Q9BQT9 956 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 CNPY3Q9BT09 278 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 PNPLA8Q9NP80 782 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SSX2IPQ9Y2D8 614 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 RWDD3Q9Y3V2 267 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 PCDHA3Q9Y5H8 950 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 MYO16Q9Y6X6 1858 aa10.12□□□□□ -0.79
HNRNPC-220ENST00000555585 GBF1Q92538 1859 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 GRXCR1A8MXD5 290 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CES2O00748 559 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 DPYSL4O14531 572 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CAPN9O14815 690 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 PSTPIP1O43586 416 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 HSF2BPO75031 334 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 DAB1O75553 588 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 SOAT2O75908 522 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 CXCL14O95715 111 aa10.11□□□□□ -0.79
HNRNPC-220ENST00000555585 LTFP02788 710 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms