RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 ITGA1P56199 1179 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 NOGQ13253 232 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 NONOQ15233 471 aaKnown RBP eCLIP5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 CCDC96Q2M329 555 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 CCDC157Q569K6 752 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 NT5DC1Q5TFE4 455 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 GRAMD4Q6IC98 578 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 PPP4R3AQ6IN85 833 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 C11orf57Q6ZUT1 292 aaPredicted RBP5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 TTC7BQ86TV6 843 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 C4orf32Q8N8J7 132 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 CNNM3Q8NE01 707 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 CCDC34Q96HJ3 373 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 DMRTA2Q96SC8 542 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 PYM1Q9BRP8 204 aaKnown RBP5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 ZMAT3Q9HA38 289 aaKnown RBP5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 VAT1LQ9HCJ6 419 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 PCMTD2Q9NV79 361 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 PTPRFP10586 1907 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 WDR81Q562E7 1941 aa5.22□□□□□ -1.57
PPP4R3A-204ENST00000554574 VWA3AA6NCI4 1184 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 F5H6K3 240 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 AKR1B10O60218 316 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 PPFIA4O75335 1185 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 GH2P01242 217 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 IGHA1P01876 353 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 NCAM1P13591 858 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 HNRNPLP14866 589 aaKnown RBP eCLIP5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 ATF2P15336 505 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 ADSLP30566 484 aaPredicted RBP5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 LONP1P36776 959 aaKnown RBP5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 ADCY7P51828 1080 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 KLRC3Q07444 240 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 TARDBPQ13148 414 aaKnown RBP eCLIP5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 PNOCQ13519 176 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 POLD3Q15054 466 aaPredicted RBP5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 POSTNQ15063 836 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SHROOM1Q2M3G4 852 aaPredicted RBP5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 DPCR1Q3MIW9 517 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 WDR72Q3MJ13 1102 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SPECC1Q5M775 1068 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 XP32Q5T750 250 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SLFN13Q68D06 897 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SARM1Q6SZW1 724 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 ABHD15Q6UXT9 468 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 Q6ZVL8 140 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 USP49Q70CQ1 688 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 NEK8Q86SG6 692 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 IRF2BP1Q8IU81 584 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 ABI1Q8IZP0 508 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SPATA20Q8TB22 786 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 POF1BQ8WVV4 589 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 EPSTI1Q96J88 318 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 RIPOR3Q96MK2 946 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SAMD11Q96NU1 681 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 GORASP1Q9BQQ3 440 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 GLT8D2Q9H1C3 349 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 MYOZ2Q9NPC6 264 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 RIC8AQ9NPQ8 531 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 PGAP2Q9UHJ9 254 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 CORO2BQ9UQ03 480 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 SIK3Q9Y2K2 1263 aa5.21□□□□□ -1.57
PPP4R3A-204ENST00000554574 RLFQ13129 1914 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 RPTORQ8N122 1335 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 BECN2A8MW95 431 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 F5H423 210 aaPredicted RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 GOLGA6L19H0YKK7 550 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 KPNA5O15131 536 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 SLC16A6O15403 523 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 AP5Z1O43299 807 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 NDUFB10O96000 172 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 MYF5P13349 255 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 SARSP49591 514 aaKnown RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 NCKAP1LP55160 1127 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 NKX6-1P78426 367 aaPredicted RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 JAG1P78504 1218 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 TNFAIP1Q13829 316 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 RRP1BQ14684 758 aaKnown RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 IL17AQ16552 155 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 THEMIS2Q5TEJ8 643 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 TMEM200BQ69YZ2 307 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 CXXC5Q7LFL8 322 aaKnown RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 OTOP2Q7RTS6 562 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 ZSCAN30Q86W11 494 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 DHX40Q8IX18 779 aaKnown RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 OR2C3Q8N628 320 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 PDILTQ8N807 584 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 TRIML1Q8N9V2 468 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 ACRBPQ8NEB7 543 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 PIK3C3Q8NEB9 887 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 DEPTORQ8TB45 409 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 CUL5Q93034 780 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 PAWRQ96IZ0 340 aaKnown RBP5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 CLPTM1LQ96KA5 538 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 AK8Q96MA6 479 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 PTPN18Q99952 460 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 TMEM39BQ9GZU3 492 aa5.21□□□□□ -1.58
PPP4R3A-204ENST00000554574 VEZTQ9HBM0 779 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms