RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHD8-207ENST00000554384 HS3ST4Q9Y661 456 aa6.04□□□□□ -1.44
CHD8-207ENST00000554384 THOC2Q8NI27 1593 aaKnown RBP6.04□□□□□ -1.44
CHD8-207ENST00000554384 ADGRA2Q96PE1 1338 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 A1L4Q6 167 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 PCDH17O14917 1159 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 SRGNP10124 158 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 IDEP14735 1019 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 TUBA3CQ13748 450 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 PUM1Q14671 1186 aaKnown RBP eCLIP6.03□□□□□ -1.44
CHD8-207ENST00000554384 TAF5Q15542 800 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 SLC5A9Q2M3M2 681 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 MRNIPQ6NTE8 343 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 VWA1Q6PCB0 445 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 TUBA3EQ6PEY2 450 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 KCNV1Q6PIU1 500 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 DPY19L3Q6ZPD9 716 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 VRK3Q8IV63 474 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 FAM71BQ8TC56 605 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 TFAP2BQ92481 460 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 LENG9Q96B70 501 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 FAM227BQ96M60 508 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 AIFM2Q9BRQ8 373 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.03□□□□□ -1.44
CHD8-207ENST00000554384 MYLK2Q9H1R3 596 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 MLXIPQ9HAP2 919 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 RIMBP3CA6NJZ7 1639 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 RIMBP3BA6NNM3 1639 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 RIMBP3Q9UFD9 1639 aa6.03□□□□□ -1.44
CHD8-207ENST00000554384 CCDC189A1A4V9 331 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 SYT5O00445 386 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 FCHO1O14526 889 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 YY2O15391 372 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 DNPH1O43598 174 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 FESP07332 822 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 KLRK1P26718 216 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 PPM1FP49593 454 aaPredicted RBP6.02□□□□□ -1.45
CHD8-207ENST00000554384 RENBPP51606 427 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 ATXN1P54253 815 aaKnown RBP6.02□□□□□ -1.45
CHD8-207ENST00000554384 GPS1Q13098 491 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 LSM12Q3MHD2 195 aaKnown RBP6.02□□□□□ -1.45
CHD8-207ENST00000554384 C4orf46Q504U0 113 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 TREML2Q5T2D2 321 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 ARMC6Q6NXE6 501 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 USP17L6PQ6QN14 398 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 SYNE4Q8N205 404 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 LNX2Q8N448 690 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 FKBP10Q96AY3 582 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 FBXL20Q96IG2 436 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 MMRN2Q9H8L6 949 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 AGO4Q9HCK5 861 aaKnown RBP6.02□□□□□ -1.45
CHD8-207ENST00000554384 FSCN3Q9NQT6 498 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 ITM2CQ9NQX7 267 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 KCTD5Q9NXV2 234 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 LPAR3Q9UBY5 353 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 RIMKLBQ9ULI2 386 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 DRG1Q9Y295 367 aaKnown RBP6.02□□□□□ -1.45
CHD8-207ENST00000554384 SLC27A6Q9Y2P4 619 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 GPR52Q9Y2T5 361 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 DTNAQ9Y4J8 743 aa6.02□□□□□ -1.45
CHD8-207ENST00000554384 BAZ1AQ9NRL2 1556 aaPredicted RBP6.01□□□□□ -1.45
CHD8-207ENST00000554384 SALL3Q9BXA9 1300 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 PIPSLA2A3N6 862 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 IPO5O00410 1097 aaKnown RBP6.01□□□□□ -1.45
CHD8-207ENST00000554384 ZSCAN9O15535 394 aaPredicted RBP6.01□□□□□ -1.45
CHD8-207ENST00000554384 TLR5O60602 858 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 NPPBP16860 134 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 ZEB1P37275 1124 aaPredicted RBP6.01□□□□□ -1.45
CHD8-207ENST00000554384 PNLIPRP1P54315 467 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 TIAL1Q01085 375 aaKnown RBP eCLIP6.01□□□□□ -1.45
CHD8-207ENST00000554384 GRM4Q14833 912 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 DTX2Q86UW9 622 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 CAND1Q86VP6 1230 aaKnown RBP6.01□□□□□ -1.45
CHD8-207ENST00000554384 SLC44A3Q8N4M1 653 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 STT3BQ8TCJ2 826 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 GRAMD1AQ96CP6 724 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 SCLT1Q96NL6 688 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 GPR20Q99678 358 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 GLOD4Q9HC38 313 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 TMOD4Q9NZQ9 345 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 USP22Q9UPT9 525 aa6.01□□□□□ -1.45
CHD8-207ENST00000554384 J3KTA2 159 aa6□□□□□ -1.45
CHD8-207ENST00000554384 CCNT2O60583 730 aaKnown RBP6□□□□□ -1.45
CHD8-207ENST00000554384 ITGA5P08648 1049 aa6□□□□□ -1.45
CHD8-207ENST00000554384 IL6RP08887 468 aaPredicted RBP6□□□□□ -1.45
CHD8-207ENST00000554384 EPHA3P29320 983 aa6□□□□□ -1.45
CHD8-207ENST00000554384 HTR7P34969 479 aa6□□□□□ -1.45
CHD8-207ENST00000554384 TIRAPP58753 221 aa6□□□□□ -1.45
CHD8-207ENST00000554384 NSUN2Q08J23 767 aaKnown RBP eCLIP6□□□□□ -1.45
CHD8-207ENST00000554384 ATP1A4Q13733 1029 aa6□□□□□ -1.45
CHD8-207ENST00000554384 TMEM95Q3KNT9 176 aa6□□□□□ -1.45
CHD8-207ENST00000554384 MIIPQ5JXC2 388 aa6□□□□□ -1.45
CHD8-207ENST00000554384 ARL6IP4Q66PJ3 421 aaKnown RBP6□□□□□ -1.45
CHD8-207ENST00000554384 SPATA5Q8NB90 893 aa6□□□□□ -1.45
CHD8-207ENST00000554384 SUPT20HQ8NEM7 779 aa6□□□□□ -1.45
CHD8-207ENST00000554384 SCAMP5Q8TAC9 235 aa6□□□□□ -1.45
CHD8-207ENST00000554384 XAGE5Q8WWM1 108 aa6□□□□□ -1.45
CHD8-207ENST00000554384 RILPL2Q969X0 211 aa6□□□□□ -1.45
CHD8-207ENST00000554384 MCRS1Q96EZ8 462 aa6□□□□□ -1.45
CHD8-207ENST00000554384 KATNAL1Q9BW62 490 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms