RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 APOBEC3GQ9HC16 384 aaKnown RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 DMAP1Q9NPF5 467 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FAM49BQ9NUQ9 324 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CFAP97Q9P2B7 532 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RAB23Q9ULC3 237 aa12.61□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ATG13O75143 517 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 BEST1O76090 585 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 NFATC1O95644 943 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 MBL2P11226 248 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 HOXA6P31267 233 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PGFP49763 221 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SLC5A3P53794 718 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 UNC93AQ86WB7 457 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PDZD8Q8NEN9 1154 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CCSER2Q9H7U1 834 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 PARD6AQ9NPB6 346 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 IL37Q9NZH6 218 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GMIPQ9P107 970 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SLC8A2Q9UPR5 921 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 THADAQ6YHU6 1953 aa12.6□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TPRP12270 2363 aaKnown RBP12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 NUP205Q92621 2012 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CHD8Q9HCK8 2581 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 COCHO43405 550 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CYP17A1P05093 508 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CD58P19256 250 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TGM1P22735 817 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ADORA2BP29275 332 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CNR2P34972 360 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 OPRD1P41143 372 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ENPEPQ07075 957 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 INCA1Q0VD86 236 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 GAB4Q2WGN9 574 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 HECTD3Q5T447 861 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 LAIR1Q6GTX8 287 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 WDR5BQ86VZ2 330 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ADGRG2Q8IZP9 1017 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 RPLP0P6Q8NHW5 317 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 SEMA4DQ92854 862 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 ERCC4Q92889 916 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 EXOC4Q96A65 974 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CCDC34Q96HJ3 373 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 IMPG2Q9BZV3 1241 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CYP3A43Q9HB55 503 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 TMEM8AQ9HCN3 771 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
TRAPPC6B-204ENST00000554018 FAM92AA1XBS5 289 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ANTXRLA6NF34 631 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SLC9A3R1O14745 358 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CETN3O15182 167 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 RETP07949 1114 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ZDHHC11BP0C7U3 371 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 FAM200BP0CF97 657 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 GTF2H1P32780 548 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 PRCPP42785 496 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SLC6A11P48066 632 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 MCCD1P59942 119 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 NUCB2P80303 420 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 DHCR24Q15392 516 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 RSPO4Q2I0M5 234 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 FBXO43Q4G163 708 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SNX30Q5VWJ9 437 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 RHBDF2Q6PJF5 856 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CEP68Q76N32 757 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 GPRIN1Q7Z2K8 1008 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 GPR161Q8N6U8 529 aaKnown RBP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 HHIPQ96QV1 700 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 NT5C1AQ9BXI3 368 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 NIF3L1Q9GZT8 377 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 RMND1Q9NWS8 449 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 COMMD8Q9NX08 183 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 USP18Q9UMW8 372 aa12.58□□□□□ -0.4
TRAPPC6B-204ENST00000554018 K7EQS6 105 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CILPO75339 1184 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 TBX18O95935 607 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 PI4KAP42356 2102 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SEC13P55735 322 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 C2orf27AQ580R0 203 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ZNF658Q5TYW1 1059 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 KRT39Q6A163 491 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ANKRD40Q6AI12 368 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 CLEC20AQ6ZU45 233 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ERMP1Q7Z2K6 904 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 SFTPA1Q8IWL2 248 aa12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC6B-204ENST00000554018 KIAA1958Q8N8K9 716 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms